Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2926 ATGGAAACTTTATCTCTAAACAGTGAAGATTCTCACAAGAAAAAAGATGGGTCTCGTTGTTGTGTCACTGATTCAAGTGCTGAGTCGAGAAAAACTAGTTTCAGTGGATCTAGTTCTACTTCTACCTCTTCAGTTTCTACTTCTACTTCAGATGAAGCTAAAGCAAAAGGGTTTTCTTCTCCTGCTCCACTTGGTTGGCCTATTCTCAAAGCTACACTTTCCAATTCAAAGCGTTCAAATTCTGATGAAAAACATAAACCTAACTTGGAGTTGGATCACAGGAAATTTACCTCTATTGGTTTAAAAATCCCAGATGTTGATATGATGAAGGAGAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCAGGAAAAGGGGTTTGCACTGCTTTGGCAATCTCTAATGCCATTACTAATCTTTGTGCTACTGCATTTGGGCAACTATGGAGACTAGAACCACTACCTTGTGAGAAGAAAGAAATGTGGCAGAGAGAGATGGAATGGCTTGTTAGCATTAGTGATCACATTGTTGAATTAATACCTTCTTGGCAAACATTTCCTGATGGAAAGAAACTCGAGGTAATGACTTGCAGGCCTAGGACAGATATTTGTATCAATCTTCCAGCCCTTCGCAAACTCGATAACATGCTACTCGAAATATTAGACAGTTTCACAGCTACAGAATTTTGGTATGTTGATCAAGGAATTGTAACCGCTGACGCAGATGGTTCAGCCTCTTTTCGCAAGTCAATTCAGCGGCAAGAAGAGAAGTGGTGGCTCCCGGTACCCCGTGTCCCCCCTGCAGGTCTCAGTGAGAACTCGAGAAAGAAGTTGAATCACTCTCGAGAAAGTGCTAGTCAAATTCTCAAAGCAGCCATGTCTATCAACAGCATTGCTTTGGCCGAAATGGAAGTTCCTGAGTCATATTTGGAAACCCTCCCTAAGAATGGAAGAGCTTGCCTCGGAGATTTTATTTACCGATACATCACATCAGATCAATTCTCCTCAGAGTGCTTACTTGATTGCTTAGACATATCTTCTGAACATATTGCACTCGAGATTGCCAACCGCGTTGAAGCTGCATTTTATGTATGGCGTCGAAGAGCTCACCACAAATCAACGCCTATTCCGAATCGTTCAACTACAAAGTCATCATGGGGGATAGTCAAGGACTTCATGCTTGATGGAGACAAGAGAGAATTGCTAGCTAATAGAGCAGAAAACATTCTGAATTCCTTGAAGCATAGGTTCCCAGGATTAACACAAACAACCTTGGATACCACCAAGATCCAATGCAACAAGGATGTTGGAAAATCTATTCTAGAAAGCTACTCTAGAGTTTTGGAGAGCATGGCTTTTAACATTGTATCACGCATCGATGATTTGCTATACGTCGATGACTTGACAAAACATTCAGATAATTTTGCATTGGTTCCTCATACAACAACAAATATGGTTTCTCATCAGAAGATTTCACATCCATTTTCGGTGTCTGTCTCCGGCACTCCACACAAAGCAGCATTTTGCACACCTAAATTGTCACCCATGCCATTGATTAGTCCTTCAAAAGGGGAGAGAACTCCTTTCCTCCACAACAATAACAACACCAACAACAACGTCAACAACATCAAACCTCAACGCCGCGGATTTGGCGTGAGAAGAGCATTGTCAAATTATCTCGGCGTTGAAACGAAAACAAAGACATGTACCAATTCAACTGAGGTCAACTGTTCAAACCCATGTAGCAAGAAAACTGAACAACCTCATAAGGAAACATGCGCCCTGAAAAACCAGACAAAATGA 1809 0.414 METLSLNSEDSHKKKDGSRCCVTDSSAESRKTSFSGSSSTSTSSVSTSTSDEAKAKGFSSPAPLGWPILKATLSNSKRSNSDEKHKPNLELDHRKFTSIGLKIPDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKEMWQREMEWLVSISDHIVELIPSWQTFPDGKKLEVMTCRPRTDICINLPALRKLDNMLLEILDSFTATEFWYVDQGIVTADADGSASFRKSIQRQEEKWWLPVPRVPPAGLSENSRKKLNHSRESASQILKAAMSINSIALAEMEVPESYLETLPKNGRACLGDFIYRYITSDQFSSECLLDCLDISSEHIALEIANRVEAAFYVWRRRAHHKSTPIPNRSTTKSSWGIVKDFMLDGDKRELLANRAENILNSLKHRFPGLTQTTLDTTKIQCNKDVGKSILESYSRVLESMAFNIVSRIDDLLYVDDLTKHSDNFALVPHTTTNMVSHQKISHPFSVSVSGTPHKAAFCTPKLSPMPLISPSKGERTPFLHNNNNTNNNVNNIKPQRRGFGVRRALSNYLGVETKTKTCTNSTEVNCSNPCSKKTEQPHKETCALKNQTK* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2926 602 ProSiteProfiles PRONE domain profile. 96 478 IPR005512 GO:0005085
Psa5g2926 602 MobiDBLite consensus disorder prediction 1 57 - -
Psa5g2926 602 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 105 472 IPR005512 GO:0005085
Psa5g2926 602 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 13 576 - -
Psa5g2926 602 MobiDBLite consensus disorder prediction 1 21 - -
Psa5g2926 602 MobiDBLite consensus disorder prediction 22 55 - -
Psa5g2926 602 Gene3D PRONE domain, subdomain 1 340 478 - -
Psa5g2926 602 Gene3D PRONE domain, subdomain 1 101 339 - -
Psa5g2926 602 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 13 576 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2926 Psa-Chr5 225806405 225809509 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2926 - - gmx:100796692 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2926 5 225806405 225809509 Psa5g2926 5 225806405 225809509 ECH
Psa5g2926 5 225806405 225809509 Psa2g0863 2 55569774 55573208 PCT