Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0863 ATGGAGACTTTATGCAACAATGGTGAAAATTCTTGTAAAGTAGTAGTTAAGAACAAGTCGTTAACTAGTTCTACTGGTTCGTGTTCTTCAGAATTGACAGAACAAGCAAAAACAGTGAAAGGGTATTCATCTCTTCCTACTCGGAAAGCTACTGTGTTCAAATGCAGTAAATCAGATGAAAAAGAAAATGAACCTTTTTCTCAAATTCAAGATAAGAAAGTTAGTAATATCAGTTCAAAACTTTCTGGATCAGGAGTGGATATGATGAAGGAAAGGTTTGCGAAACTACTGCTTGGTGAAGATATGTCAGGTTCTGGAAAAGGAGTTAGCACTGCTTTGGCTATCTCAAATGCTATTACTAATTTGTGTGGAACTGTATTTGGGCAATTATGGAGACTAGAGCCTGTGCCTTGTGAGAAGAAAGAGATGTGGCAGAGAGAAATGGATTGGCTTCTTTGTGTTGGTGATCATATTGTTGAGTTAATGCCTTCTTGGCAAACATTTCCAGATGGTAGTAAGCTTGAGATAATGACTTGCAGACCAAGATCAGATATTTTTATCAATCTTCCAGCTCTGCGTAAACTCGACAACATGCTTCTTGAAATTTTAGATAGTTGCACAGCTATGGAGTTTTGGTATGTGGACCAAGGAATCGTCGCGCCAGATGTAGAAGGATCGGCCTCTTTTCGAAAACGAAATCAGCGGCAAGAGGAGAAGTGGTGGCTCCCTGTACCTCGTGTTCCCCCTGCCGGTCTCAGTGAGAATTCAAGAAAGAAGTTGAATCACACGCGCGAATGCGCTAGCCAAATTCTTAAAGCAGCCATGTCTATCAACAGCATTGCTTTAGCTGATATGGAAGTTCCTGAGTCCTATTTGGAATCCCTTCCTAAGAATGGAAAAACTTGCTTAGGCGATTTTATTTATCGATACATCACATCGGACCAATTCTCTCAAGAGTGCTTGCTTGATTGCATAGACATTTCGAATGAACATGTTGCACTAGAGATTGCTAACCGTTTGGAAGCTGCGATTTTCGTATGGCACCGAAGATCTCACTCTAGACCACCGCTTTATCCTATCCGTTCGACTACAAAGTCGTCTTGGGACATTGTCAAGGACTTCATAGTTGATGGAGATAAGAGAGAATTGCTTGCAGAGAGAGCTGAAAACATTCTACTATCGTTGAAGCAGCGATTTCCGGGCTTAAGTCAAACTACATTGGATAGCACCAAGATCCAATGCAACAAGGATGTTGGAAAATCAATACTAGAAAGCTATTCAAGAGTTTTGGAGAGTATGGCATTTAACATAGTAGCTCGTATAGATGATTTACTATATGTTGATGACTTAACCAAACATTCAGATAGGTTTCCATTGGCTCCAATGGTTAATAACATGGTTTCTGGGGAGTCCGGAGAAGTCAGAAACACCAACGGACGATCAATGCTCCAGGACCACAAGAGACACCAGAAAAAGGTTTCACAACAATTGTTAGTGTCTGTCTCAGACACTCAACACAACAAAACAAAATTTGGCACACCTAGTTGTTCACCTGTGTCACTAATTAGTCCTGTAAAGGGAGAGATAATAACTCCCTTTATCCGCAACAAAAACGACATGATTAAGCCTCAACGACGCGGTTTCGGTGTGAAGAGAGTGTTGTCGAATTATCTTGGAGCAGAGATGAAAGCAGCAAAGGTGTTTAGCAACTCAACAACTCATGAGGTGAGTAGCTCAAATTCAAGTTGCTATAAAACAGAAGAACAAGAGAGGAAGAGAGAAATATGTGCCATGAAAAGCAAGACAAAATGA 1812 0.4062 METLCNNGENSCKVVVKNKSLTSSTGSCSSELTEQAKTVKGYSSLPTRKATVFKCSKSDEKENEPFSQIQDKKVSNISSKLSGSGVDMMKERFAKLLLGEDMSGSGKGVSTALAISNAITNLCGTVFGQLWRLEPVPCEKKEMWQREMDWLLCVGDHIVELMPSWQTFPDGSKLEIMTCRPRSDIFINLPALRKLDNMLLEILDSCTAMEFWYVDQGIVAPDVEGSASFRKRNQRQEEKWWLPVPRVPPAGLSENSRKKLNHTRECASQILKAAMSINSIALADMEVPESYLESLPKNGKTCLGDFIYRYITSDQFSQECLLDCIDISNEHVALEIANRLEAAIFVWHRRSHSRPPLYPIRSTTKSSWDIVKDFIVDGDKRELLAERAENILLSLKQRFPGLSQTTLDSTKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDLTKHSDRFPLAPMVNNMVSGESGEVRNTNGRSMLQDHKRHQKKVSQQLLVSVSDTQHNKTKFGTPSCSPVSLISPVKGEIITPFIRNKNDMIKPQRRGFGVKRVLSNYLGAEMKAAKVFSNSTTHEVSSSNSSCYKTEEQERKREICAMKSKTK* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0863 603 Gene3D PRONE domain, subdomain 1 78 320 - -
Psa2g0863 603 Gene3D PRONE domain, subdomain 1 321 457 - -
Psa2g0863 603 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 86 452 IPR005512 GO:0005085
Psa2g0863 603 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 28 575 IPR038937 GO:0005085
Psa2g0863 603 ProSiteProfiles PRONE domain profile. 76 458 IPR005512 GO:0005085
Psa2g0863 603 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 28 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0863 Psa-Chr2 55569774 55573208 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0863 - - gmx:100796692 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2926 5 225806405 225809509 Psa2g0863 2 55569774 55573208 PCT