Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2681 ATGGATTCAACTTCAACATTCCCTCAACAACAACAGAGGCAGGATCATTGTGTTCACGATCTTCATCCCACCGTCGACGAACACTCCTCCATTGTTTCCGATTGCGAGAGCAGTGTTTCCGGCAACACCAGACAACAACAGCAACAAAATTCCGATTCGTTTTTAGTTAGGCTTGGAGAAGGCGATGTTGTTCATGACCTAATAAAAACGAGATTCCTTCGTGGACTCGGTTCGCTCTCGAACCAAACGGAGATTCTAGCAATTCACAGAAACGCCTGTTCCGATGTAGTTTCTCAAGCGCGCCTTCAATCCTTTCACGTTTACGCGGGAGCTGTTTCTAAACTCCGCGGTGGAAATTCAAATGTCAAATATGCTTGGTACGGAACATCATCTGAGAATGACGTAAGAGACATTCTTTCAAACGGTTTTAGTCATGTCCACGGTCATAGCCTCTGCCTCTCTCCAGATGATTCTCCTCTCCAAAGTGTGAAAAGCTGTCTTGTTGGAAGAGATGGCGCGAGGCATTTGATCCTGTGTAAGGTGATTTTAGGAAGGGCGGAGATTGTGAAACCTGACACAAAACAATGTTATCCAAGCTGTGAGAATTATGATTCTGGTGTGGATAGTTTTTCAGCTCCAACCAAGTACATGATTTGGAGTAGTAGAATGAATACTCATGTTTGGCCTGCCTATGTTATAAGCTTCAGGGTTTCTTCATTCAAAGAGATTGGGATGAGTGAAGAAGAACATGTGAGACCAACTTCACCTTGGATGCCGTTTCCAAATTTAATTTCTGTGCTCTCCAAGGTTTTGCCATCGCTTGATATTGCTTTGATATCCAAGTTTTACAAAGCTAAACAGGAAAGGAAGATTTCGCGACATGAATTGATACAGAAAGTTAGACAAATTGCTGGAGACAAGTTGCTGATTTCGGCCATCAATTCTTACAGAGCAAAGAAAAAACCTACAAATTTCCTGCAAACAAGGTCAAGGAATGACAACTAG 1005 0.4269 MDSTSTFPQQQQRQDHCVHDLHPTVDEHSSIVSDCESSVSGNTRQQQQQNSDSFLVRLGEGDVVHDLIKTRFLRGLGSLSNQTEILAIHRNACSDVVSQARLQSFHVYAGAVSKLRGGNSNVKYAWYGTSSENDVRDILSNGFSHVHGHSLCLSPDDSPLQSVKSCLVGRDGARHLILCKVILGRAEIVKPDTKQCYPSCENYDSGVDSFSAPTKYMIWSSRMNTHVWPAYVISFRVSSFKEIGMSEEEHVRPTSPWMPFPNLISVLSKVLPSLDIALISKFYKAKQERKISRHELIQKVRQIAGDKLLISAINSYRAKKKPTNFLQTRSRNDN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2681 334 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 23 325 IPR044964 -
Psa5g2681 334 Pfam RCD1-SRO-TAF4 (RST) plant domain 252 317 IPR022003 -
Psa5g2681 334 SUPERFAMILY ADP-ribosylation 55 236 - -
Psa5g2681 334 Gene3D - 54 237 - -
Psa5g2681 334 ProSiteProfiles PARP catalytic domain profile. 42 255 IPR012317 GO:0003950
Psa5g2681 334 ProSiteProfiles RST domain profile. 251 322 IPR022003 -
Psa5g2681 334 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 23 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2681 Psa-Chr5 204121841 204124891 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2681 - - gmx:100791977 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1354 4 94690246 94693828 Psa5g2681 5 204121841 204124891 PCT