Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1354 ATGGAGCGACCAATTCAAGATTCACCAGAGAGATTCACCGGCGACGACGACGACTCGGCGGTTTCCGATTGCGAGAGTGTTGCTTCCGGCGGCCACGTTTCTGAGAGGCATATTCGGAAGACAGATGGTGCCGATATGAACCTAATTCGAACTAGATTCGTTTGCGGTTTGAGCACGCAAGGGTTGAAAGCCGATGTGGTATCGATTCAGAGGAATCCTTGTTCATCTGTAATGGCACAAGCGAGAATTCAATCGTTTCAGATCTTCGCACGCGCGGTCGCGAAACTTCGCGGTGGAAATGCGAACGTGAAACACGTTTGGTATGGTGCTTCTAGTAAGGAAGAGATTGATGATATTATTCAACACGGTTTTGGTCATGCTCATAGTAATGGTTTGCGTTTCTCTCCCAATGATTCACCTCTCGAAAGTGTGAAAAGTTCTGTTGTTGATAAAGACGGTTTGAGGCACTTGTTGCTGTGTCGTGTGATTCTTGGAAAGATGGAGGTTGTGGCAGCGGATTCTGAGCAATGCCGTTCGAGTTCTGAAGAGTATGATTCTGGGGTGGATAGTTTTTCATCTCCCAAAGAGTACATTGTTTGGAGTAACAGGATCAACACGCATGTGTTGCCTGAATATGTTTTGAGTTTCAAACTTGCTTCCAACAAAGGACATGAGAAGGTTGGAGTTGGGGGGCAATCTATGAGACCGTCTTCGCCTTGGATGCCATTCACGGTCCTAATTTCCGTGCTTTCCAAGATGTTGCCTCCGTCTGATATTGTTTTCATTGCCAAGTTTCACAAGGAGTATAGAGAAAAGAAGATTACGCGACATGAATTGACACAAAAAGTTAGACTAATAGTGGGAGACAAGTTGCTGGTTTCTGTTATCAAATCTTTCAGAGCAAAGGTACTTCTAATCAGTGTTATCAAATATCCGCAATGGCGGTGCCATGGCCGATATACGTAG 966 0.4524 MERPIQDSPERFTGDDDDSAVSDCESVASGGHVSERHIRKTDGADMNLIRTRFVCGLSTQGLKADVVSIQRNPCSSVMAQARIQSFQIFARAVAKLRGGNANVKHVWYGASSKEEIDDIIQHGFGHAHSNGLRFSPNDSPLESVKSSVVDKDGLRHLLLCRVILGKMEVVAADSEQCRSSSEEYDSGVDSFSSPKEYIVWSNRINTHVLPEYVLSFKLASNKGHEKVGVGGQSMRPSSPWMPFTVLISVLSKMLPPSDIVFIAKFHKEYREKKITRHELTQKVRLIVGDKLLVSVIKSFRAKVLLISVIKYPQWRCHGRYT* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1354 321 ProSiteProfiles RST domain profile. 234 305 IPR022003 -
Psa4g1354 321 Gene3D - 40 218 - -
Psa4g1354 321 SUPERFAMILY ADP-ribosylation 80 218 - -
Psa4g1354 321 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 13 309 IPR044964 -
Psa4g1354 321 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 13 309 - -
Psa4g1354 321 MobiDBLite consensus disorder prediction 1 21 - -
Psa4g1354 321 Pfam RCD1-SRO-TAF4 (RST) plant domain 235 300 IPR022003 -
Psa4g1354 321 ProSiteProfiles PARP catalytic domain profile. 1 241 IPR012317 GO:0003950
Psa4g1354 321 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1354 Psa-Chr4 94690246 94693828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1354 - - gmx:100784311 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1354 4 94690246 94693828 Psa5g2681 5 204121841 204124891 PCT