Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2676 ATGGCAACAACAACAACTGCCCCAGCCATGAAAAAATCATGGTCGAGGGGCTCCGACTCAACTCAGTTCGAATCTCCGGCACGTTTCTGCTCTCCCTTACGATGGGATGCAACAGACTCACCGGAATACCGATCACCTGAAAACTCACCCGGAAAGATGGTAGAAAACTCAATGGCAGTAATTACCGTCGACAAGCCAAAACATATTTCACAAGAGAAACTCCCTGACCAACGGAAGCTACCGCCGGAGAATACCGTTGCGGTGTTCACCCGATCAGAGAGAGAGGAGCCTCAGCGGCAGGCGACGAAAGTGGAGACTGCAGAAAAAGGTGGGGAGCGGAGACCGAAGCCGGCTCCGGTAAGGTGTACGGCGGAGGAGGTTACGAGAAAGGCGGGGTTAGGGTTCCGGCTATGCGAGGTGGTGGTGTGTCTGATTTCGTTTTCGGTTATGGCTGCAAATAAGACGCAAGGTTGGAGCGGGGACTCTTATGATCGTTATAAAGAATACAGGTATTGTTTATCAATGAATGTTATCGGATTTGCATACTCAGGGTTACAAGCTTGTGATCTAGCCTTTCAACTAGTCACAGGAAAACACATGATCAGTCACCACCTTCGCTACCATTTCCAGTTCTTCATGGATCAGGTTGTGGCATATCTTCTGATATCAGCATCATCCTCTGCAGCCACAAGGGTGGATGATTGGCAATCAAATTGGGGGAAAGACGAGTTCACTGAGATGGCTACTGTTTCAGTTGGAATGTCATTTCTGGCTTTTGTTGCATTTGCTATGAGCTCACTCATCTCTGGTTACATCCTATGTAACGGCCGTAACTCCATGTAA 843 0.4864 MATTTTAPAMKKSWSRGSDSTQFESPARFCSPLRWDATDSPEYRSPENSPGKMVENSMAVITVDKPKHISQEKLPDQRKLPPENTVAVFTRSEREEPQRQATKVETAEKGGERRPKPAPVRCTAEEVTRKAGLGFRLCEVVVCLISFSVMAANKTQGWSGDSYDRYKEYRYCLSMNVIGFAYSGLQACDLAFQLVTGKHMISHHLRYHFQFFMDQVVAYLLISASSSAATRVDDWQSNWGKDEFTEMATVSVGMSFLAFVAFAMSSLISGYILCNGRNSM* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2676 280 MobiDBLite consensus disorder prediction 1 56 - -
Psa5g2676 280 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 64 280 - -
Psa5g2676 280 MobiDBLite consensus disorder prediction 1 27 - -
Psa5g2676 280 PANTHER CASP-LIKE PROTEIN 64 280 - -
Psa5g2676 280 MobiDBLite consensus disorder prediction 89 118 - -
Psa5g2676 280 Pfam Casparian strip membrane protein domain 128 261 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2676 Psa-Chr5 203650831 203652070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2676 - - gmx:100789870 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1346 4 94285997 94288086 Psa5g2676 5 203650831 203652070 ECH
Psa5g2676 5 203650831 203652070 Psa5g2676 5 203650831 203652070 ECH
Psa4g1346 4 94285997 94288086 Psa5g2676 5 203650831 203652070 PCT