Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1346 ATGAAGAACACATCGTCGAGGAACTCCGATTCCTCCTCTCACTTTGATTCACCTCACTCTCCTCTCCGATTTCGATCTTCTCCGTTATCCGACGGCGGCGATCCGTTTCACTCCACCGAAAACTCACCGGAAAATGATAATTCCAGAGCCATCGTAATCATAGAGCCTTCATTACAATACTCTCAAGTCGCAGCACCTTTACCGGATTCCGAACACCGGAACCCGCCGTCGAATGACCACCCGGCAGTGGTGGTTAACAGAGCCATGAGGAATGATCCTCCTCCTACCGCAACGAATCTAGGCCACCCCGTCACCGGAGGAGGCCGTGAAGACGGCGGAGGAAGGGGAAGACCAAGGACAAACACGCCGACGTCAACAGCATGGTCGAAAAGTGATGTAGTGACGGGAAAAGTAGCGTTAGGGTTCCGATTGAGCGAGGTGGTGCTTTGCCTAATTTCGTTTTCCGTTATGGCTGCGGATAAGACTCAAGGTTGGAGCGGTGACTCCTTTGATCGCTATAAAGAATACAGGTATTGTTTGTCTATGACAGTTATAGCTTTTGTATATGCGGGTTATCAAGCTTGTGAATTGGCCTATCAACTTATAAAAGGAAAACACATAATCAATCACCACTTGCGTTTTCATTTTGATTTCTTCATGGATCAGGTTCTGGCATATCTTCTGATATCATCAGCATCATCAGCTGCGACACGGGTTGATGACTGGCAATCAAATTGGGGAAAAGATGAGTTCACAGAGATGGCTAGTGCTTCTATTGCAATGGCCTTTCTTGCTTTCATTGCCTTTGCTATTAGCTCGCTTATCTCTGGTTACAACCTATGTAACCGCTACCCTTAG 858 0.4732 MKNTSSRNSDSSSHFDSPHSPLRFRSSPLSDGGDPFHSTENSPENDNSRAIVIIEPSLQYSQVAAPLPDSEHRNPPSNDHPAVVVNRAMRNDPPPTATNLGHPVTGGGREDGGGRGRPRTNTPTSTAWSKSDVVTGKVALGFRLSEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSMTVIAFVYAGYQACELAYQLIKGKHIINHHLRFHFDFFMDQVLAYLLISSASSAATRVDDWQSNWGKDEFTEMASASIAMAFLAFIAFAISSLISGYNLCNRYP* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1346 285 MobiDBLite consensus disorder prediction 1 24 - -
Psa4g1346 285 MobiDBLite consensus disorder prediction 32 47 - -
Psa4g1346 285 PANTHER CASP-LIKE PROTEIN 4A3 70 283 - -
Psa4g1346 285 MobiDBLite consensus disorder prediction 1 47 - -
Psa4g1346 285 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 70 283 - -
Psa4g1346 285 Pfam Casparian strip membrane protein domain 137 268 IPR006702 -
Psa4g1346 285 MobiDBLite consensus disorder prediction 94 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1346 Psa-Chr4 94285997 94288086 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1346 - - lang:109357411 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1346 4 94285997 94288086 Psa5g2676 5 203650831 203652070 ECH
Psa4g1346 4 94285997 94288086 Psa4g1346 4 94285997 94288086 ECH
Psa4g1346 4 94285997 94288086 Psa5g2676 5 203650831 203652070 PCT