Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1367 ATGAAATCAGGGAAATTGGGATTCTTTGTTGTGCTACTCTTGTTGAGTTCATCTACTTGTTTAGCTTGGTTTGGTAGTAGTAAACACAAAACTTCAACTGCAAATGAACAATCCTCCTCCTCCTCCTCCTCATCATCATCACCTTCGTTCTTAAACCGTTTTCGTTCTGGCTCATCCGTCGTGTTCCCGGTTCACGGAAATGTTTACCCTGTTGGTTTTTATAATGTGACTCTCAACATTGGGAATCCACCAAGGCCATATTTTCTTGATATTGACACGGGTAGCGACCTAACATGGCTTCAATGTGATGCACCTTGCTCCCGGTGCTCCCAGACACCCCATCCGCTTTACCGGCCTAGCAATGACTTAGTCCCCTGCAGGCATCCCCTCTGTGCATCTGTGCATCAGACAGATAACTATGACTGTGAAGTCCAGCATCAGTGTGACTATGAAGTTGAGTATGCAGATTTTTACTCATCCCTTGGTGTACTTGTCAATGATGTCTATGTTCTCAACTTTACAAATGGAGTCCAACTGAAAGTTCGTATGGGACTTGGATGTGGATATGATCAGATTTTTCCAGAATCCTCCTACCACCCTGTAGATGGTATGCTTGGTCTTGGCAGGGGAAAATCTAGCTTGATATCACAGTTGAGTAGTCAGGGTTTGGTGAGAAATGTGGTTGGACACTGTTTGAGTGCACAAGGAGGAGGATACATCTTCTTTGGAGATGTTTATGATTCGTCTCGATTGGCTTGGACTCCAATGTCATCGAATGATCACAAACATTACTCAGCAGGGCCAGCTGAACTCGTTTTTGGAGGGAAGAAGACTGGGTTTGGAAATCTTTTAGCTGTTTTTGACACTGGGAGTTCTTACACTTACTTCAACTCCAACACTTATCAAGCACTAATTTCTTGGTTGACAAAAGAATTAGCTGGAAAGCCTATACAAGAAGCACCTGAAGACCAAACTCTCCCTCTATGTTGGTCTGGAAAAAGACCTTTTAGAAGTGTATATGACGTCAAAAAATACTTCAAGCCTATTGCGTTTAGTTTCCCAGGCTGTGGGAGAACAAAAGCCCAATTTGAAATCCCTCCTGAAGCATACCTGATAATATCAAACATGGGAAATGTTTGCTTGGGCATTCTAAATGGCTCTGAAGTAGGAATGGAGGATCTGAACCTAATCGGAGACATATCCATGCTGGACAAAGTGATGGTATTTGACAATGAGAAGCAGTTGATTGGTTGGGCACCAACAGATTGTAACCGGGTTCCAAAATCCAGAGATATCAGCATTTGA 1305 0.4307 MKSGKLGFFVVLLLLSSSTCLAWFGSSKHKTSTANEQSSSSSSSSSSPSFLNRFRSGSSVVFPVHGNVYPVGFYNVTLNIGNPPRPYFLDIDTGSDLTWLQCDAPCSRCSQTPHPLYRPSNDLVPCRHPLCASVHQTDNYDCEVQHQCDYEVEYADFYSSLGVLVNDVYVLNFTNGVQLKVRMGLGCGYDQIFPESSYHPVDGMLGLGRGKSSLISQLSSQGLVRNVVGHCLSAQGGGYIFFGDVYDSSRLAWTPMSSNDHKHYSAGPAELVFGGKKTGFGNLLAVFDTGSSYTYFNSNTYQALISWLTKELAGKPIQEAPEDQTLPLCWSGKRPFRSVYDVKKYFKPIAFSFPGCGRTKAQFEIPPEAYLIISNMGNVCLGILNGSEVGMEDLNLIGDISMLDKVMVFDNEKQLIGWAPTDCNRVPKSRDISI* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1367 434 Gene3D Acid Proteases 53 243 IPR021109 -
Psa5g1367 434 PRINTS Pepsin (A1) aspartic protease family signature 80 100 IPR001461 GO:0004190|GO:0006508
Psa5g1367 434 PRINTS Pepsin (A1) aspartic protease family signature 285 296 IPR001461 GO:0004190|GO:0006508
Psa5g1367 434 PRINTS Pepsin (A1) aspartic protease family signature 395 410 IPR001461 GO:0004190|GO:0006508
Psa5g1367 434 ProSiteProfiles Peptidase family A1 domain profile. 74 419 IPR033121 -
Psa5g1367 434 Pfam Xylanase inhibitor C-terminal 285 419 IPR032799 -
Psa5g1367 434 Gene3D Acid Proteases 244 427 IPR021109 -
Psa5g1367 434 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 428 - -
Psa5g1367 434 SUPERFAMILY Acid proteases 66 426 IPR021109 -
Psa5g1367 434 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 285 296 IPR001969 GO:0004190|GO:0006508
Psa5g1367 434 Pfam Xylanase inhibitor N-terminal 74 244 IPR032861 -
Psa5g1367 434 PANTHER ASPARTYL PROTEASES 2 428 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1367 Psa-Chr5 107002137 107008217 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1367 56 429 Miscellaneous Gene Families AT1G44130 52.785 1.52e-145 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1367 - - gmx:100812524 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1367 5 107002137 107008217 Psa5g1367 5 107002137 107008217 ECH
Psa6g0954 6 36796185 36799245 Psa5g1367 5 107002137 107008217 PCT