Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1184 GGAGAAAAATCATTAGTATCAACTTAGGTGAATTCAGTGTTTTTTCATCCAAAGGATTCATGCAGAAGCGTAGAAAACTTCCATTAAGCATTCTACTATGGAGATTCCTTGGTGCAACCGTTTTTTCAATAGCTATCACTTGTTTCTTCTTTGTTCATCATGTTCACGTATCCACTACTTCTCCATTTCATCATGAAAAGTTCAATAAAAAGATTCACACGTTTCGTGACCTGCAAAGCTGGACCCAAGAGCTCGTTCCTCTCCATTTATATAAAGATCAACTCTCTGCTTCTAAGTTGAATGATTCAAGAGAGGATACAGAATCAAACTATGAGAAACTATGGAAGCCTCCACCAAATCATGGATTTCTACCTTGTACAAAGCCTACCCTTAATTATACAACTCCTGAAAATTCGCGTGGTTACCTTCTAGTACATACAAATGGTGGACTCAACCAAATGCGCACCGGGATATGTGATATGGTAGCTATAGCTCGCATTATAAATGCCACCCTTGTAATTCCAGAGCTTGATAAAAAGTCATTTTGGCAAGATAATAGCAATTTCTCTGATATCTTTGATGAAAAGAGGTTTATCAGTTCTCTTGCTGACGATATAAAAATCATTAAGAAACTTCCCGAGGATCTGATGGATGCAACCAAAACGGTGAAGCAGTTCAAAAGCTGGTCTGATATGGATTACTATCAAAAAGAGATTGCATCCCTTTGGGATGATTTCAAAGTTATTCAAGCTTCCAAATCCGATTCTCGATTAGCGAATAACAATCTACCTCCAGATATTCAGAAGCTTCGTTGTCGTGCTTGTTTTGAAGCTCTTCGTTTCTCTCCTCGCATTGAACAGATGGGAAAATTATTGGTGGAGAGGATGAGATCATTTGGTCCTTATATAACATTACACTTACGTTACGAGAAGGATATGCTTGCATTTAGCGGATGCACGCACGGTTTATCAACTTCTGAGGCCGAAGAACTACGAATTATCAGAGAGAATACTAGTTATTGGAAAAGAAAGCATATTGATCCTACTGAAGAGAGGTCTAAAGGGAATTGTCCCTTAACTCCAAACGAAGCTGGAATTTTCCTTAGTGCTCTTGGATACCCTACAAAGACTCCGATGTATATTGCTGCAGGGGAGATATATGGGGGTGAGTCTCATATGACTGAACTGCGGTCGCGATATCCGTTTTTAATGAGCAAGGAAAAGTTGGCATCTATTGATGAGCTTGAACCATTTTCAAATCACGCGTCTCAAATGGCCGCTCTTGATTATATTGTATCTGTTGAAAGCGATGTGTTTGTACATTCTTACCCTGGAAACATGGCACGGGCCGTGGAAGGCCATCGTCGTTTTCTTGGAAGAGGAAGAACCATATCTCCAGATAGGAAAGCTCTCGTTCGTTTGTTTGATAAACTAAAAACTGGATCAATGGTTGAGGGGAAAAAGCTGTCCAATAAAGTGAATGCTCTCCACCAAGTAAGGTTAGGCTTATTAAGGAAGAGAAAAGGACCCATTTCTGGAACAAAGGGTGTCGACAGGTTTCGGTCGGAAGAAACATTTTACGCAAATCCTTTACCCGATTGTTTATGTCAGGCTGAAAACACATACTCATCATAA 1634 0.3978 RKIISINLGEFSVFSSKGFMQKRRKLPLSILLWRFLGATVFSIAITCFFFVHHVHVSTTSPFHHEKFNKKIHTFRDLQSWTQELVPLHLYKDQLSASKLNDSREDTESNYEKLWKPPPNHGFLPCTKPTLNYTTPENSRGYLLVHTNGGLNQMRTGICDMVAIARIINATLVIPELDKKSFWQDNSNFSDIFDEKRFISSLADDIKIIKKLPEDLMDATKTVKQFKSWSDMDYYQKEIASLWDDFKVIQASKSDSRLANNNLPPDIQKLRCRACFEALRFSPRIEQMGKLLVERMRSFGPYITLHLRYEKDMLAFSGCTHGLSTSEAEELRIIRENTSYWKRKHIDPTEERSKGNCPLTPNEAGIFLSALGYPTKTPMYIAAGEIYGGESHMTELRSRYPFLMSKEKLASIDELEPFSNHASQMAALDYIVSVESDVFVHSYPGNMARAVEGHRRFLGRGRTISPDRKALVRLFDKLKTGSMVEGKKLSNKVNALHQVRLGLLRKRKGPISGTKGVDRFRSEETFYANPLPDCLCQAENTYSS* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1184 543 PANTHER OS02G0726500 PROTEIN-RELATED 17 539 - -
Psa5g1184 543 Pfam GDP-fucose protein O-fucosyltransferase 141 456 IPR019378 -
Psa5g1184 543 PIRSF UCP009360 9 539 IPR024709 -
Psa5g1184 543 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 17 539 - -
Psa5g1184 543 CDD O-FucT_plant 141 462 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1184 Psa-Chr5 92239124 92242316 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1184 83 538 Miscellaneous Gene Families AT1G22460 66.667 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1184 - - gmx:100807411 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1184 5 92239124 92242316 Psa5g1184 5 92239124 92242316 ECH
Psa2g1614 2 127299331 127303464 Psa5g1184 5 92239124 92242316 PCT