Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1614 ATGCTGAGAAGGAGGTTGATTTCGTTGGTATTGTTAAGGAAACTGTTAACTGCAGCTATATGTTTAATAGCTGTTGTGGCTCTTTTCTCTGTTCATTTTCATATTGTTCCCTCCTCTAAGGATCATAAGTTCAATGACAAGATCACCACGACTCGGGACTTGCAAAGCTGGACGCGGGAGCTAGCTCCACCCCATTTATCCAAAGCAGCACTTCAGACTCCCAAGTTGAATGGTTCCATACGGGATTCAGATTACGAGAAGCTGTGGAAGCCTCCATCGAATCGCGGGTTTCTTCCCTGTACAACGCCTTCACCTAATTACACTACTCCCGTGGAGTCACGAGGATATCTCTTAGTTCATACAAATGGGGGGCTCAACCAAATGCGCTCTGGGATATGTGATATGGTAGCTGTAGCTCGTATCCTAAATGCTACTCTTGTAATTCCAGAACTCGATAAAAGATCGTTTTGGCGAGATACAAGCAATTTCTCTGATATTTTTGATGAAGACCATTTTATTAATTCTCTAGCTAACGATGTCAAAATAATTAAGAAGCTTCCCGATGAACTGGTTAATGAAACCAGAAAGGTCAAGCAATTCATAAGTTGGTCTGGCATGGATTATTATGAGAATGAGATTGCAAAGTTGTGGGAAGATTACCAAGTTATTCGTGCTTCCAAGTCTGATTCACGGCTAGCGAACAACAATCTACCTCCAGACATTCAGAAGCTTCGCTGCCGAGCTTGTTATGAAGCTCTTCGTTTCTCTCCTCGCATTGAACAAATAGGAAAATTGTTAGTTGAGAAAATGAGGTCATTGGGTCCTTATATTGCTCTGCATTTACGTTATGAGAAGGATATGCTTGCGTTTAGCGGGTGCACACATGATTTATCTCTAGATGAAGCTGAAGAGTTACGGATTATCAGGGAGAACACTTCCTATTGGAAAGTAAAGGATATTGACCCTATTGAACAGAGATCCAAAGGGTTTTGCCCCTTAACTCCAAAGGAAGTTGGTATTTTTCTTACAGCTCTTGGATATCCATCGAAGACACCGATCTATATTGCTGCTGGCGAGATATATGGGGGTGAGTCTCATATGGCCGAACTGCGATCCCGTTATCCATTGTTAATGAGCAAGGTAAGGAATTACAGTACTCATGTGTTGCTTTGTCGCGCATTTTTATTCAACATTTGTGTATCTCATGATCAATTTCAGGAAAAGTTGGCATCTTTTGAGGAGCTTGAACCCTTTTTCAATCATGCTTCTCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGTGATATATTTATACCCTCTTATTCTGGAAACATGGCAAGGGCTGTTGAAGGTCATCGCCGTTTTCTTGGGCGTGGAAGATCAATATCTCCGGATAGGTAA 1407 0.4151 MLRRRLISLVLLRKLLTAAICLIAVVALFSVHFHIVPSSKDHKFNDKITTTRDLQSWTRELAPPHLSKAALQTPKLNGSIRDSDYEKLWKPPSNRGFLPCTTPSPNYTTPVESRGYLLVHTNGGLNQMRSGICDMVAVARILNATLVIPELDKRSFWRDTSNFSDIFDEDHFINSLANDVKIIKKLPDELVNETRKVKQFISWSGMDYYENEIAKLWEDYQVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEQIGKLLVEKMRSLGPYIALHLRYEKDMLAFSGCTHDLSLDEAEELRIIRENTSYWKVKDIDPIEQRSKGFCPLTPKEVGIFLTALGYPSKTPIYIAAGEIYGGESHMAELRSRYPLLMSKVRNYSTHVLLCRAFLFNICVSHDQFQEKLASFEELEPFFNHASQMAALDYIVSIESDIFIPSYSGNMARAVEGHRRFLGRGRSISPDR* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1614 468 Pfam GDP-fucose protein O-fucosyltransferase 405 457 IPR019378 -
Psa2g1614 468 Pfam GDP-fucose protein O-fucosyltransferase 116 385 IPR019378 -
Psa2g1614 468 PANTHER OS02G0726500 PROTEIN-RELATED 406 468 - -
Psa2g1614 468 PANTHER OS02G0726500 PROTEIN-RELATED 5 383 - -
Psa2g1614 468 PIRSF UCP009360 400 468 IPR024709 -
Psa2g1614 468 PIRSF UCP009360 1 389 IPR024709 -
Psa2g1614 468 CDD O-FucT_plant 116 463 IPR024709 -
Psa2g1614 468 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 406 468 - -
Psa2g1614 468 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 5 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1614 Psa-Chr2 127299331 127303464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1614 60 468 Miscellaneous Gene Families AT1G22460 67.482 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1614 - - gmx:100795727 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1614 2 127299331 127303464 Psa5g1184 5 92239124 92242316 PCT