Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1146 ATGTTGCGAAGAGCTGCAACCAATGCATATTCATGGTGGTGGGCTAGCCACATTAGAACAAAACAATCAAAATGGCTCGAACAAAGTCTCCAAGATATGGAGGAGATAGTAGGTGAGACGCTCAAAATCATCGATGATAGCGGCGACTCGTTTGCCCAAAGGGCTGAAATGTACTACAGAAAAAGACCAGAACTGATCAATTTTGTGGAAGAAGCCTTTAGAGCATATAGAGCATTAGCAGAGAAATATGATCATCTGTCAAAGGAACTCCAAAGCGCGAATCGCACAATTGCCACTGTCTTCCCGGAACAAGTCCATTACAGAATAGACGACGAAGAAGAATTTGAGGACGGGGAAAGCGGTTTCCGTGAAACCAATTCACCATCTCCTAACATTAATAACCAAACAGAAAAACAATGTAACATCCCTAAACCTCCGAGTATCCCGAAGAAGGTTTTTCGAAGTCCGTCTATGTTGCTCTCAAGAAAAGGAACAATTAAAAGGAGTTTAAGCACAGCAAAATCTGTTTCGAATTCAACAGTTCAATGTTCAGGTTTGAGTGAGGTTGAAGCATTAGCCGAAATAGACAAGCTTCAGAAAGATATTTTGGCTATGCAGACCGAGAAAGAGTTTGTAAGGAGTTCGTATGAACATTCCTATGAAAAGTATTGGGAAATCGAAGACAAAATTACCGTAATGCAAAAAAGAGTTTACACCTTGCAAGACGAATTCAGAATTAGTACGGTCATTGAAGATAACGAAGCTAGAGCTTTAATGGCCGCCACAGCTTTAAATTCGTGTAAAGAAACTCTAAATAAGTTGAAAGAAGTACAATCGCAATCATCCGAAGAAGCTAGAGAAGCATACCAAAAAGTTAAGGAAGCCCATTACAAATTTGAAAACCTTAGAGGTAACTTCAGTTCCAAGCAACCAAATCAAGATGAAAAAACAGATTCAGAAAGCAAAGATGAAGAAGATACACTTGAGCATGATATAGAGATGTTGCAAGAACGGATTAAGGAAAAGCTCGGGGAAGATTCCGGAAACTCACTTACGATGAAGGAAATTGCAAAGATGATCGATGAGCTTGTGAGTAAGGTAGTAAGTTTCGAAACAAAAGTTAATTCTCATAATGGATTGGTAAAGAGATTGATATCAGAAGCTGATGAACTTCAAACAAATGTACAAAGCTTAGAAGAGGATAAGGAAGTGCTTATTGAGGATTCGGATAACAGTAAAAAGAGGATGAAAGAATTGGAAGATGAATTGAACAGAGTTAAAACTCTCAACCAAAGTGTCAAAAGCCAAGATAATAATCTCCAAACATATTTTCATGAAGCTAGTTTTAATCTCGAGCATCTTTCAGGAAGATTGAAAAATGTGAAGCTAGATGAGGAAGAAGAGAATTCGGTACTTAGCAAGAACACAAGTTTTTCCGATGGAAAACTGAGTGAGGATTTCAAAAAGCATTTACATGAATTTTTAAGTGATAATTTAGAAATCGTGAATGATGTCAAGATAACAAATGCGGAGAAGGAAGATCATGATGCAAATATTGATGAAGTCGTAAACGAAGATGATCGGCAGGATAAGGATGGTTTGTCTGAGATGACAAGTAACGTTGAAGTCGAACCACTTGATTTGGAACCTGCGGAGGGAAAAGATCAAACTAACTTGAATCAGATGCTTATAAATGGATCAGATAACAGAGAAAAGATTATGTTGGAAGAGTACACGTCGGTTTTGAAGAACTATAACGATGTATCGGACAAGCTCAACAATGTGGAAAACAAAAATCGGAACAGCATTTTCGAATTGGCACTTCAGGTGAGGGAATTGAAGAATGTAGTTGCCACAAAGGACGAAGAGATACACATTTTAAATAAGAAGCTGACATCTTCAGAACCAAACTCGGATGAAAGTCCTCGCACCACTCTATCCGAAGAAGCGCCTTGTGGAAACGCGGAACAAGGAGATAACACGCAGGGCTCCGAAACTCTATCTTCAGATATAGTTAGCACTTCTGTTGAAGAGCAGCAGCAACCTGATGAAAACACGGGAAACTTCAACGAGTCGTCTATTGGAAGAACAAGATTAATTGTGGTGAGAGAAAAACACATTGACAAGCCACATTCTCTTTCACCTTTAGAAAGGAAACTACGTTTGGAAATCGATGATTTACTCGAGGAGAATTTAGAGTTTTGGTTAAGGTTCAGCACTTCGGTTCATCAGGTTCAACAGTTCCAAAAATCTTTACTAGACTTAAAAGCAGAAGTGAGAAGAGCAAAGCATAATAACCTTTTTTCAGAAAACAAGAACTCATCAAAAATTATACAATCAGAAATAAAACCAATATTTATGCATCTGAGAGAAATAAGAACCGAGTTATCGCTGTGGCTAGAACACAATGAAGTGTTGCAGGATGATTTACAGGCTAGACATCCGTCATTGTGCAGCTTACAGGATGAAATAGCAAGTGCGGCAAATCCAGATACATCGGCGAAGACAGTTGAACTAAGCGAGTATCAAGCTGCAAAGTTTCAAGGCGAAGTTCTCAACGTGAAACAAGAGAGCAACAAGGTTTCTAGTGAACTACAAGAAGGTTTGACTTATGTACAAGGACTTAAATTTGAAGTTGAGAAAATACTTGAAGAGTTGAGTCAAATAATGGGAGTTAACAATCCTGATCACATAAAACAGTCGTCGAGTCGCACTAAATTACCTTTGAAGTCTTTCTTGTTTGGAATGAAGTTGAAGAAACAAAAACAATCAATGTTTGCATGTGTTAATCCAACACTGCAGAGACAATACAGTGATCTTACAGCAGCTAATGATGCACCAATATAG 2847 0.3832 MLRRAATNAYSWWWASHIRTKQSKWLEQSLQDMEEIVGETLKIIDDSGDSFAQRAEMYYRKRPELINFVEEAFRAYRALAEKYDHLSKELQSANRTIATVFPEQVHYRIDDEEEFEDGESGFRETNSPSPNINNQTEKQCNIPKPPSIPKKVFRSPSMLLSRKGTIKRSLSTAKSVSNSTVQCSGLSEVEALAEIDKLQKDILAMQTEKEFVRSSYEHSYEKYWEIEDKITVMQKRVYTLQDEFRISTVIEDNEARALMAATALNSCKETLNKLKEVQSQSSEEAREAYQKVKEAHYKFENLRGNFSSKQPNQDEKTDSESKDEEDTLEHDIEMLQERIKEKLGEDSGNSLTMKEIAKMIDELVSKVVSFETKVNSHNGLVKRLISEADELQTNVQSLEEDKEVLIEDSDNSKKRMKELEDELNRVKTLNQSVKSQDNNLQTYFHEASFNLEHLSGRLKNVKLDEEEENSVLSKNTSFSDGKLSEDFKKHLHEFLSDNLEIVNDVKITNAEKEDHDANIDEVVNEDDRQDKDGLSEMTSNVEVEPLDLEPAEGKDQTNLNQMLINGSDNREKIMLEEYTSVLKNYNDVSDKLNNVENKNRNSIFELALQVRELKNVVATKDEEIHILNKKLTSSEPNSDESPRTTLSEEAPCGNAEQGDNTQGSETLSSDIVSTSVEEQQQPDENTGNFNESSIGRTRLIVVREKHIDKPHSLSPLERKLRLEIDDLLEENLEFWLRFSTSVHQVQQFQKSLLDLKAEVRRAKHNNLFSENKNSSKIIQSEIKPIFMHLREIRTELSLWLEHNEVLQDDLQARHPSLCSLQDEIASAANPDTSAKTVELSEYQAAKFQGEVLNVKQESNKVSSELQEGLTYVQGLKFEVEKILEELSQIMGVNNPDHIKQSSSRTKLPLKSFLFGMKLKKQKQSMFACVNPTLQRQYSDLTAANDAPI* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1146 948 Coils Coil 745 765 - -
Psa5g1146 948 PANTHER PROTEIN NETWORKED 2D 1 940 - -
Psa5g1146 948 PANTHER PROTEIN NETWORKED 2A 1 940 - -
Psa5g1146 948 Coils Coil 610 630 - -
Psa5g1146 948 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Psa5g1146 948 MobiDBLite consensus disorder prediction 630 691 - -
Psa5g1146 948 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Psa5g1146 948 Coils Coil 188 208 - -
Psa5g1146 948 Coils Coil 325 345 - -
Psa5g1146 948 MobiDBLite consensus disorder prediction 303 328 - -
Psa5g1146 948 Coils Coil 381 439 - -
Psa5g1146 948 Coils Coil 69 96 - -
Psa5g1146 948 MobiDBLite consensus disorder prediction 629 691 - -
Psa5g1146 948 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1146 Psa-Chr5 89352226 89355840 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1146 - - gmx:100805236 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1146 5 89352226 89355840 Psa5g1146 5 89352226 89355840 ECH
Psa2g1517 2 115712687 115717391 Psa5g1146 5 89352226 89355840 PCT