Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1517 ATGTCAATCAACATCAAAGCAAGTAATGCATATTCTTGGTGGTGGGCTAGCCACATTAGGACAAAGCAATCAAAATGGTTGGATCAATGCCTACAAGATATGGAAGAGAAGGTGACTGATACACTAAGAATCTTACAAAATGATGGAGACTCATTTTCTCAAAGAGCCGAAATGTATTATAGGAAGAGGCCAGAGCTTGTTGAATTTGTAGAAGAAGCCTTTAGAGCATATAGAGCTTTAGCAGAAAGATATGATCATTTATCAAGAGAACTTCAAAGTGCAAATAGAACAATTGCAAGTGTTTTTCCTGATCAAGTTCCATGCCAAATGGACGATGACGAATACGACGAAAGTGACGCGGGAACATCAACCTTTCCGTCTCCTGACCTCCACAACCAAATGCAAAAATCACCCACCATTCCGAAAGTTCCAAAGATTCCAAAGAATGAATTTCGAAATCCTTCAATGTTGCTATCGCGGAAAAGTACAATGAAGAAAACTTCAAGTTCGCCAAAATATGTTCATACAATTCCAAGATCAGGTCTCACAAAAGATGCGGCGTTAGGTGAAATCGACAAACTTCAGAAAGAGATTTTAGTGTTGCAGACCGAGAAAGAGTTCGTGAGAAGCGTGTATGAACGCGCGTACGAAAAGTATTGGGAAATCGAAGATGAGATAACTGGTATGCAGAAAAATGTTTGCAGCCTGCAAGATGAGTTTGGTATTGGTACTGTCATCGAAGACGACGATGCAAGAGCTTTAATGGCAGCAACTGCGTTGAAATCGTGTCAACAGACACTTTCGAAGCTTCAAAAGATACAAGCACAATCATCAATAGAGGCTAAAGTTGAATATGAAAGGGTTAGAAAGGCTCATGAGATGTTTGAGAATCTTAGAGACCAATTCATTACTAAATTCATGAAAGAACACGAACACGAACACGAACACGAACACGACAAAAAACGCAAGAGCGGAATAAGTGAAGAACAGAAAAACATTGATGAAGAGATAGCTAATTTGGAACAACAAGAGGACGATGTTGTTTCGTTACGAGAAAAGATTAAGGAAAAACTGGAACAAGATTCTGGAAACGCTCTTACCGTGACTGAAATGGCCGAGTGCATCGACGAGCTCGTGAATAAGGTGGTTACATTGGAAACTGCAGTGTCTTCTCAAACCGTTATGGTTAATCGGTTGAGATCAGAAACCGACGAACTTCAAACAAATGTAAAGACATTGGAAGAGGACAAAGAAATGCTGATAGCAGGATCAGAAGCTACTAACAAGAAGCTAAAAGAAATCGAAGAGGAACTGTTGAGAGTTAAAATTCTCAACAAAAGTGTTAGAAAACAAGATAACAGCTTAAGAACACATTTTACGGAAGCTAGTTGCAACATCGAGCATTTATCAGGAAAGTTGAATAATATGAAGCATGATATTGAAGATGAGAGTTTAGTACTTTACAAGAAGAAGAAAAGTGCTTCTGATATCGACGATTCTGTTACGAAAGATGTTAGTACAGTAGAGAAAAAACATGATGGTGATGGAAATTCGGATGTTAAAACGACGATTATGAGTCAAAATACGAATTTTATGATTGAAAGGATTGAAAAAATGAGAGAACATGATAAGGATGGTATGACTGATGTAATGAGCAATGTTGATATTGAATCACAAGATTTGGAAACTGGTGAGGATGATCAGCCTAATTGGAGGAACATGTTTGTGAGTGGATTGGATGATAGAGAGAAAATTCTGTTGGAAGAGTATACATCTGTTTTGAGAAACTATAAAGATGTTAGAACGAAGCTTAATGATGTTGAACAGAAAAATAGAGACAGCATTTTTGAGTTGGCACTTCAGTTAAGAGAAATGAAGAATGCTCTTGTAACAAGGGACAACGAGATACAATTTCTACATCAAAAGCTAAACTTTCCAGACTCAAATCCTGATGAAAGTCCATACACAACAACAACAACAACAACAGAATACAAATACACACCACATGAAGCACTTATTCGAAAATCAGGTCAAGGATCCAACATGCAAGAAATCGATATCGCATCTTTAAACATGGAGACAAACACAATGACAACACCTAATGTAGCAGACCAACAACATGATCAAAACTCAACAAACCTTGGCCTAAAAATGACCCTTGAGAAGCTCATGGCTCACCAAGACAAACGGCAAGACCTTTCGGATTTAGAAAAGAAATTCCGTTCGGACATCGACGATCTCCTCGAAGAAAACCTCGAGTTTTGGCTAAGATTCAGCACCTCAGTTCACCAGATTCAAAAGTTCCAAAACTCAATACAGGACTTAAAGGCCGAACTAAAGACAATAAAGGAAAACAACAGCAAATCCGAAGGACATTCTCATTCGAAACAACATCAATATACGCAATCTCAACTTAGGCCGATTTTCCGACACTTGAGAGAAATCAGAACTGAACTATCACTTTGGCTTGAACACAATGCAGTACTGCAAGATGAACTACAAGGTAGATACTCATCATTATGCAACATTCAAGACGAAATAGCAAAAGCCGGTAATAACGCAGAGTCTAAAAACAGCGAAAAAACGGAGATAATAAGTGGTTATCAAGCTGCAAAATTTCAAGGTGAGATTCTTAACATGAAACAAGAGAATAGCAAAGTTGCAAGTGAATTGCAAGCTGGGCTAAGTCTTGTGAAAGGAATGAAGAATGATGTTGAGAAAACACTTGATGAACTTGATCAACAAATTGGGGTGAGTAGTGTTCATAGTGAGACAAAGAGAAACACAAGAGGGAATAGAATACCTTTGAGGTCTTTTCTGTTTGGTGTCAAGTTGAAGAGACAAAAACATCATCAATCATTGTTTGCATGTGTTAATCCTACACTGTCTAAACAAAATAGTATCAATGATGAAGCACCAGCTCCAATATAG 2931 0.3797 MSINIKASNAYSWWWASHIRTKQSKWLDQCLQDMEEKVTDTLRILQNDGDSFSQRAEMYYRKRPELVEFVEEAFRAYRALAERYDHLSRELQSANRTIASVFPDQVPCQMDDDEYDESDAGTSTFPSPDLHNQMQKSPTIPKVPKIPKNEFRNPSMLLSRKSTMKKTSSSPKYVHTIPRSGLTKDAALGEIDKLQKEILVLQTEKEFVRSVYERAYEKYWEIEDEITGMQKNVCSLQDEFGIGTVIEDDDARALMAATALKSCQQTLSKLQKIQAQSSIEAKVEYERVRKAHEMFENLRDQFITKFMKEHEHEHEHEHDKKRKSGISEEQKNIDEEIANLEQQEDDVVSLREKIKEKLEQDSGNALTVTEMAECIDELVNKVVTLETAVSSQTVMVNRLRSETDELQTNVKTLEEDKEMLIAGSEATNKKLKEIEEELLRVKILNKSVRKQDNSLRTHFTEASCNIEHLSGKLNNMKHDIEDESLVLYKKKKSASDIDDSVTKDVSTVEKKHDGDGNSDVKTTIMSQNTNFMIERIEKMREHDKDGMTDVMSNVDIESQDLETGEDDQPNWRNMFVSGLDDREKILLEEYTSVLRNYKDVRTKLNDVEQKNRDSIFELALQLREMKNALVTRDNEIQFLHQKLNFPDSNPDESPYTTTTTTTEYKYTPHEALIRKSGQGSNMQEIDIASLNMETNTMTTPNVADQQHDQNSTNLGLKMTLEKLMAHQDKRQDLSDLEKKFRSDIDDLLEENLEFWLRFSTSVHQIQKFQNSIQDLKAELKTIKENNSKSEGHSHSKQHQYTQSQLRPIFRHLREIRTELSLWLEHNAVLQDELQGRYSSLCNIQDEIAKAGNNAESKNSEKTEIISGYQAAKFQGEILNMKQENSKVASELQAGLSLVKGMKNDVEKTLDELDQQIGVSSVHSETKRNTRGNRIPLRSFLFGVKLKRQKHHQSLFACVNPTLSKQNSINDEAPAPI* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1517 976 Pfam KIP1-like protein 12 85 IPR011684 GO:0003779
Psa2g1517 976 PANTHER PROTEIN NETWORKED 2D 7 967 - -
Psa2g1517 976 Coils Coil 424 451 - -
Psa2g1517 976 Coils Coil 184 204 - -
Psa2g1517 976 Coils Coil 70 97 - -
Psa2g1517 976 Coils Coil 323 360 - -
Psa2g1517 976 Coils Coil 396 416 - -
Psa2g1517 976 Coils Coil 765 792 - -
Psa2g1517 976 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 11 91 IPR011684 GO:0003779
Psa2g1517 976 PANTHER PROTEIN NETWORKED 2A 7 967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1517 Psa-Chr2 115712687 115717391 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1517 - - mtr:MTR_5g066340 1490.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g1517 2 115712687 115717391 Psa5g1146 5 89352226 89355840 PCT