Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0667 ATGGGTAGGAACAAAATCCAACTATCTCATAGTAAAACAGATGGGTTTTTCTCACTTTCTCATGAAGACTACTCTTATCCTGGAGGTTTGTTTGCTAGTGTTGGCCAAATGGGAATAGGGTTTGGTGTTCAACAACCCAATCCTTCTGATTCCAATGAAAATGGTGATGACCCTAAACTTCCTTTCAATGAATTATACGTTAAGTATATTCAATCACTGTGGAAATTTGAGGCTAATGGGGTTAAGGTGAAGGGGGAAGTGGAAGAAGGTGAAGAAGGTGTTAAGGCCAAGAGTAAAAATGGTGGGTTTAAACTCAGGATTAAGATTAGGAATCCTTCTATTAGAAGGCTGTGTAGTGGAGCAATTGCCGGGGCGATTTCTCGTACCACTGTGGCGCCATTGGAGACTATTAGGACTCATTTGATGGTTGGGAGTAGTGGTCATTCTAGCACTGAGGTTTTCAATGATATTATGAAAACGGATGGATGGAAGGGTTTGTTTAGGGGTAATCTAGTTAATGTCATTCGTGTTGCGCCGAGCAAGGCCATTGAGCTATTTGCTTATGATACGGTAAACAAGAACCTATCCGCAAAGCCCGGGGAGCAATCCAAACTCCCAGTTCCTGCATCATTGATTGCAGGTGCCTGTGCTGGAGTGAGTTCAACTATATGCACATATCCACTTGAACTACTCAAGACTAGACTAACTATCCAGAGAGGTGTTTATAATGGTCTCCTTGATGCATTCGTGAAAATAATTAAAGAAGAGGGTCCTGCCGAACTATACAGAGGCCTTACTCCTAGTCTTATTGGTGTTATTCCATATTCTGCTACCAATTACTTTGCCTATGACACACTACGCAAAGCATACCAGAAAATTTTCAAACAAGAGAAGATTGGCAACATTGAAACCCTTTTGATTGGTTCAGCAGCTGGTGCTATTTCAAGTACTGCGACTTTTCCACTCGAGGTGGCTCGCAAGCAAATGCAAGTTGGAGCTCTCAGTGGAAGACAGGTTTACAGAGATGTCCTTCATGCACTTGTTAGCATACTAGAAAAAGAAGGGATCCAGGGTCTATATAGAGGGCTTGGACCTAGTTGCATGAAGTTAGTGCCGGCCGCAGGAATCTCTTTCATGTGTTACGAAGCATGCAAGAAGATACTTATAGATAATGACGAGAAGGAATGA 1188 0.4234 MGRNKIQLSHSKTDGFFSLSHEDYSYPGGLFASVGQMGIGFGVQQPNPSDSNENGDDPKLPFNELYVKYIQSLWKFEANGVKVKGEVEEGEEGVKAKSKNGGFKLRIKIRNPSIRRLCSGAIAGAISRTTVAPLETIRTHLMVGSSGHSSTEVFNDIMKTDGWKGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSAKPGEQSKLPVPASLIAGACAGVSSTICTYPLELLKTRLTIQRGVYNGLLDAFVKIIKEEGPAELYRGLTPSLIGVIPYSATNYFAYDTLRKAYQKIFKQEKIGNIETLLIGSAAGAISSTATFPLEVARKQMQVGALSGRQVYRDVLHALVSILEKEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKKILIDNDEKE* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0667 395 Gene3D Mitochondrial carrier domain 109 393 IPR023395 -
Psa5g0667 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 299 387 IPR018108 -
Psa5g0667 395 PANTHER SOLUTE CARRIER FAMILY 25 21 394 - -
Psa5g0667 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 205 289 IPR018108 -
Psa5g0667 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 194 IPR018108 -
Psa5g0667 395 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 21 394 - -
Psa5g0667 395 Pfam Mitochondrial carrier protein 204 292 IPR018108 -
Psa5g0667 395 Pfam Mitochondrial carrier protein 113 196 IPR018108 -
Psa5g0667 395 Pfam Mitochondrial carrier protein 299 391 IPR018108 -
Psa5g0667 395 SUPERFAMILY Mitochondrial carrier 112 383 IPR023395 -
Psa5g0667 395 PRINTS Mitochondrial carrier protein signature 116 129 IPR002067 GO:0055085
Psa5g0667 395 PRINTS Mitochondrial carrier protein signature 129 143 IPR002067 GO:0055085
Psa5g0667 395 PRINTS Mitochondrial carrier protein signature 169 189 IPR002067 GO:0055085
Psa5g0667 395 PRINTS Mitochondrial carrier protein signature 220 238 IPR002067 GO:0055085
Psa5g0667 395 PRINTS Mitochondrial carrier protein signature 262 280 IPR002067 GO:0055085
Psa5g0667 395 PRINTS Mitochondrial carrier protein signature 308 330 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0667 Psa-Chr5 53398273 53401016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0667 1 394 Organic Solute Cotransporters AT4G32400 64.020 6.33e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0667 K14684 - qsu:111999876 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0667 5 53398273 53401016 Psa5g0667 5 53398273 53401016 ECH
Psa6g0680 6 23062473 23065898 Psa5g0667 5 53398273 53401016 PCT