Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0089 ATGGCGTCTTCCTCCCGAGCAAGGAGTAGTTCACCGTTTTCTCATCGGAAACCTTCAACTCCTTATTCTTCTACTTCTTCGTCTTCTTCTCTTACTAACGGAAGGATAATACCTCGTTCTTCGTCTTCCACTACGTCGTCGTTTTTCAACCCTGGAGGTCGATCCACGACTCCGAGTCGAGGTCGGAGTGAGTCAACGAATTACGGCTCGCGCGGTTATAGAGATCGTTCTCCGGTTGCGTTTGGAGCGGAGGAGCTGATTGTTGACCCTGTCGATACGTCTAGGTCAGCGGATAGCATTTCCGTCACGATTCGGTTTCGTCCTTTGAGTGAAAGAGAGTATAATAAAGGAGACGAGATCGCTTGGTATGCCGATGGAGATAAGATTGTTAGAAATGAATATAATCCAGCTACTGCTTATGCATTTGATAGAGTTTTTGGACCACATACCATATCAGATGAGGTGTATGAAGTAGCTGCCAAACCTGTGGTGAAGGCTGCCATGGAAGGCGTCAATGGAACTGTGTTTGCCTATGGCGTGACCAGTAGTGGTAAGACACATACTATGCATGGTGATCATAATTCTCCCGGTATAATACCATTAGCTATAAAGGATGTTTTCAGCATGATTCAAGATACTCCAGGAAGAGAATTCCTACTTCGAGTGTCATATCTAGAAATATACAATGAGGTGATAAATGATTTGCTTGACCCAACTGGTCAAAATTTACGGGTCAGAGAAGATTCACAGGGAACTTATGTTGAGGGTATAAAGGAAGAGGTTGTTCTATCTCCTGGGCATGCCCTTTCTTTTATTGCTGCTGGAGAAGAGCATCGTCATGTTGGATCAAATAATTTTAATCTCTTTAGCAGCAGGAGTCACACAATATTCACACTGATGGTTGAAAGCAGTGCCCACGGTGATGACTATGATGGAGTGATATTCTCTCAGCTTAATTTGATTGATTTGGCTGGATCTGAAAGTTCCAAAACTGAAACTACTGGATTAAGAAGAAAAGAAGGATCTTACATCAACAAAAGTCTTTTGACACTTGGAACAGTTATAGGAAAATTGAGCGAGGGGAAAGCATCTCATGTTCCGTATCGAGATTCAAAGCTAACCCGCCTCTTGCAATCTTCTCTTAGTGGGCATGGCCATGTTTCACTTATATGCACGATAACTCCTGCCTCCAGCAATATGGAGGAGACTCATAATACTTTGAAGTTTGCCAGCAGGGCGAAACGAGTAGAAATATATGCGTCACGTAATAAGATCATTGATGAAAAGTCTCTAATTAAAAAATACCAGAGAGAAATTTCTGTTCTCAAACTAGAACTTGATCAACTAAAAAAGGGAATGCTTGTTGGTGTCAGTCATGAGGAGATTATGACCTTAAAGCAGAAGTTGGAAGAAGGTCAAGTGAAAATGCAGTCAAGATTAGAAGAAGAGGAGGATGCCAAGGCTGCTCTTATGAGTAGGATTCAGAGGCTAACCAAACTCATTCTGGTTTCTTCAAAGAATGCAATTCCTGGATATCTCACTGAAGCTCCTAACCACCAGCGAAGTCACTCTTTTGGCGAGGAAGATAAACTTGATGCTTTTCGGGATGGTATGTTGATTGAAAGTGATAGCAAAAAAGATACTTCTGCAGTGTCATCACATCTGTTTCATGATGGTAGACATAAAAGATCATCAAGTAGATGGAATGATGAATTCTCCCCAACTAGCAGTGCTGTTACTGAATCAACACAAGCTGGTGAACTGATCACCAAAACAAAACTGGCAGCAGGTGGGGTGACAATGTCTGATCAGATGGATCTTCTTGTTGAGCAAGTCAAGATGCTAGCTGGAGATATCGCTTTCAGTACCAGCACTCTGAAGCGCTTGATAGAGCAATCTGTAAATGACCCTGATGGATCCAAAAGTCAGATTGAGAACTTAGAACGTGAAATCCAAGAAAAAAGGAAGCAGATGAGGTTGTTAGAGCAAAGATTAACAGAGACCAGTGAATCATCTATGGCTAATTCATCACTAGTTGAAATGCAGCAGACAGTCTCAAGATTAATGACTCAGTGCAATGAAAAAGCCTTTGAGTTGGAGATCAAATCTGCAGACAACCGTGTCCTTCAGGAGCAGCTAAATGATAAGTGTTCTGAAAACAGAGAGTTGCAAGAGAAGTTGAAACGACTTGAGCAGCAACTGGCAGCAAGTGGTTCATCATTATCTTCTGAACAATATGCATCTGGAGAAAATGCTAATGAGTTAAAAAAGAAGATACAATCCCAGGAAATTGAAAATGAGAAACTTAAGCTAGAGCAAGTTCACTTGTCAGAAGAGAATAGTGGGTTGCGTGTGCAGAATCAGAAACTATCTGAAGAAGCTTCTTATGCCAAAGAGCTGGCATCTGCTGCTGCTGTAGAACTGAAGAATTTGGCTGGGGAAGTGACAAAACTTTCATTGCAGAATGCGAAGTTGGAAAAAGAATTGATGACTGTAAGGGACCTGGCCAACTCCCGTGCTGCCATTCAAACGGCTAACGGTGTTAACCGTAAGTATAGTGATGCAAGATCTGGGAGGAAGGGGAGGATTTCTAGCCGTGTTAATGACATTTCAGGAGCTGGACTAGATGGTTTTGAGTCATGGAATCTTGATGCTGATGATTTGAGGCTAGAACTGCAGGCAAGGAAACAGAGAGAAGCTGCTCTGGAGGCTGCATTATCTGAGAAGGAATTTGTGGAAGAGGAGTTAAGGAAAAAGGCTGAAGAAGCCAAGAAAAGAGAGGAAGCCTTAGAGAACGATTTAGCTAATATGTGGGTCCTTGTTGCTAAGTTAAAAAAAGACGGGGGAACTGTCCCAGAATCAAACATTGATAAAAAAATTGATGGGGCTCAAAATTTTAACGATCGGAAAAGTAATGACAGTGAATGTAATTTTGTCTCTAAGGAGCAGCATTTGGATGCATCAAAACCACATGGTGAAATTCCGAAGGAAGAGCCCCTGGTTGTGCGTCTCAAGGCTCGTATGCAAGAGATGAAGGAAAAAGAACTCAAGTACCTTGGGAATGGTGACGCCAATTCCCATATTTGTAAAGTATGTTTTGAATCTCCTACCGCTGCTATTCTTCTTCCATGCCGACATTTTTGTTGTAAGTATTTTTAA 3159 0.4191 MASSSRARSSSPFSHRKPSTPYSSTSSSSSLTNGRIIPRSSSSTTSSFFNPGGRSTTPSRGRSESTNYGSRGYRDRSPVAFGAEELIVDPVDTSRSADSISVTIRFRPLSEREYNKGDEIAWYADGDKIVRNEYNPATAYAFDRVFGPHTISDEVYEVAAKPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDHNSPGIIPLAIKDVFSMIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDSQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMVESSAHGDDYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKASHVPYRDSKLTRLLQSSLSGHGHVSLICTITPASSNMEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKLELDQLKKGMLVGVSHEEIMTLKQKLEEGQVKMQSRLEEEEDAKAALMSRIQRLTKLILVSSKNAIPGYLTEAPNHQRSHSFGEEDKLDAFRDGMLIESDSKKDTSAVSSHLFHDGRHKRSSSRWNDEFSPTSSAVTESTQAGELITKTKLAAGGVTMSDQMDLLVEQVKMLAGDIAFSTSTLKRLIEQSVNDPDGSKSQIENLEREIQEKRKQMRLLEQRLTETSESSMANSSLVEMQQTVSRLMTQCNEKAFELEIKSADNRVLQEQLNDKCSENRELQEKLKRLEQQLAASGSSLSSEQYASGENANELKKKIQSQEIENEKLKLEQVHLSEENSGLRVQNQKLSEEASYAKELASAAAVELKNLAGEVTKLSLQNAKLEKELMTVRDLANSRAAIQTANGVNRKYSDARSGRKGRISSRVNDISGAGLDGFESWNLDADDLRLELQARKQREAALEAALSEKEFVEEELRKKAEEAKKREEALENDLANMWVLVAKLKKDGGTVPESNIDKKIDGAQNFNDRKSNDSECNFVSKEQHLDASKPHGEIPKEEPLVVRLKARMQEMKEKELKYLGNGDANSHICKVCFESPTAAILLPCRHFCCKYF* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0089 1052 Coils Coil 466 500 - -
Psa5g0089 1052 MobiDBLite consensus disorder prediction 1 72 - -
Psa5g0089 1052 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1003 1051 IPR013083 -
Psa5g0089 1052 SMART kinesin_4 97 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0089 1052 Pfam Kinesin motor domain 105 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0089 1052 Coils Coil 808 835 - -
Psa5g0089 1052 ProSitePatterns Kinesin motor domain signature. 316 327 IPR019821 GO:0003777|GO:0005524|GO:0007018
Psa5g0089 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 451 IPR027417 -
Psa5g0089 1052 MobiDBLite consensus disorder prediction 1 74 - -
Psa5g0089 1052 ProSiteProfiles Kinesin motor domain profile. 99 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0089 1052 Coils Coil 752 779 - -
Psa5g0089 1052 MobiDBLite consensus disorder prediction 551 579 - -
Psa5g0089 1052 Coils Coil 706 740 - -
Psa5g0089 1052 Coils Coil 644 671 - -
Psa5g0089 1052 CDD KISc_CENP_E 99 416 - -
Psa5g0089 1052 CDD RING-HC 1029 1050 - -
Psa5g0089 1052 MobiDBLite consensus disorder prediction 551 568 - -
Psa5g0089 1052 PRINTS Kinesin heavy chain signature 170 191 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0089 1052 PRINTS Kinesin heavy chain signature 284 301 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0089 1052 PRINTS Kinesin heavy chain signature 317 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0089 1052 PRINTS Kinesin heavy chain signature 366 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0089 1052 PANTHER KINESIN-RELATED 1 999 IPR027640 GO:0003777|GO:0007018
Psa5g0089 1052 Coils Coil 432 452 - -
Psa5g0089 1052 Coils Coil 885 937 - -
Psa5g0089 1052 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 1 999 - -
Psa5g0089 1052 Gene3D Kinesin motor domain 90 446 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0089 Psa-Chr5 4824462 4835920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0089 35 1050 Miscellaneous Gene Families AT4G39050 71.923 0.0 1431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0089 K11498 - gmx:100785855 1672.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0089 5 4824462 4835920 Psa2g3535 2 386414749 386420881 ECH
Psa5g0089 5 4824462 4835920 Psa5g0089 5 4824462 4835920 ECH