Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5178 ATGGGGTGCACAGCTTCTAAGCTTGATAACGAGGAAACCGTACGGCGGTGCAAGGAGCGCCGCCGCTTCATGAAGGACGCGGTTTACGCTCGCCACTACCTAGCAGCAGCGCATTCTGAATACTGTAACTCTCTTCGCCTCACCGGTTCGGCACTTTGTACATTCGCCGCCGGTGAACCTCTTGCCGTCTCCGATGATATCCCTGCCGTTTTTGTCAATGCACCTAAGCAGAACATGTATCATCCTCCACCTCCACCATCACCTCCTCCTCCTGCAGCGACTGTAACAACCTCCAAAATTCCTAACGCTTCTGAAACTCGTCACCGGAAACCACCGCGGAAGCTTCCACACATTCTCTCTGAGTCTAGCCTTTGTTCCACGCCTAGAAGCGAGTTTCCAAACTGGTTCTTTCCAACAGCGCATCAAACTCTTTCCACGGCTTCCGAAACCTCGTCCGTTTGGAATTGGGAGAATTTTCATCCACCTCCGTCTCCACCAAGTTCAGAATACTTCCGGCAACGTTCTCAACCGCCGAATCACAATCCAGAATGTTCGAGTTTCGAAGTTCCCGGATCCGATTCATCATCGGAAACCTTTTACAACACGATCCACTCGAAACTTCATCTTCCGAATCGTGAAATTAAAACTATAAAAGTTGATTCTCAAAATCAACATCTGCGGGACCGTTTATGTAGCGAAGATACTGCGAGCGAGAGATCCGAACCAGAACCAGATCGTTCGGAAACTGAACGAGAGGAGGTCCGGTGCAGTGACTGGGAGGACTGTTACGGCTCAACAAGCTCATCAGATAGGGAGGAAGTAATCGCCAGATTGAGATCATCAGTGAAACCGGAGTCAGTTACCGACGGCGATATTCCGGCAAGAGAAGACAAGAAAACCGGCGAGGAATTGCTTGAGGAAAAGGTTATGATGAAGCATAAGGATTTAAAAGAGATTGTAGAGGTGATAAAAGAGAATTTTGAGAAAGCGGCGGTTGCCGGAGATAAGTTATCGGAGATGCTACATATTAGTAGGGCACAACTTGATCGGAGTTTCAGTCAATTGAAGAAAATAGTGTATCACTCGAGTAATTTACTTAGCAGAGTAAACTCGAGTTGGACTTCAAAACCGCCATTGGCAGTTAAGTACCGGTTCGATGCCGGTTCGCTTGAAAGACCGGGAGGTCCGAAGAGTCTCTGCTCCACTTTGGACCGGCTTTTGGCTTGGGAAAACAAACTCTGTCAGGAAGTCAAGGGCAGAGAAAGTGTTAAGATTGAACATGAAAGGAAACTGTCAGCTCTGCAGAACCAAGAATGCAAAGGAGGTGATGATGAAACAAAGATAGACAGAACCAAGGCTACCATTACAAGGTTACAGTCCCTAATTATTGTAACATCTCAAGGTGTGTCTACTACCTCAGCTGCCATTAATGATCTTAGAGACTCTGATCTTGTTCCTCAGCTTGTTGAACTTTGTCACGGAATCATTTACATGTGGAGATCAATGCACCAGTACCATGAAACTCAAAGCAACATTGTACAGCAAGTCTGTGGCCTTGTGAACCGATCTTCAAAAGGTCACTCAACATCTGAATCGCACAAACAGGCCACTCGAGATCTCGAATTAGCCTTGTCAGCTTGGCATTCAAGTTTTATCCGAATCATAAAATTTCAAAGAGACTTTATTCTATCTATACATGGATGGTTTAAGCTGAACCTCATTCCAGTCACTAATGACAACAACAACATCAAAACCATTGAACCATCTGTTGCATTTTCCTTTTGTGATGAATGGAAACTAGCCCTCGACCGTGTTCCTGACACGGTTGCTTCAGAAGCAATCAAAAGCTTCGTCAATGTTGTCCATGTGATATCTGTTAAGCAATCTCAAGAGCTCAAGATTAAAAAGAAAACTGACACTGCTTACAAGGAGCTTGAGAAAAAATCTTCATCTTTAAGAAACATAGAAAAGAAGTTTTACAACTCGTATTCTATGGTTGGTATTGGAATAATTCCAAACTCTGTGGATCATATTGGACAAGGCTTGGATGCAAGAGACCCTCTTGCTGAGAAAAAGTTGGAACTTGAAGCTTGTCAAAGACGCGTCGAAGATGAAAAGATGAAGCATTCAAAGGCTGTTGAGGTTACTAGAGCCATGACACTTAACAATTTACAGACAGGTTTACCTGGAGTGTTTCAGGCGTTAACAAGTTTTTCTTCTTTATTCATTGAGGCTCTTGAGTCAGTTTGTGACCGTTCATATGCCATCAAGTAG 2274 0.445 MGCTASKLDNEETVRRCKERRRFMKDAVYARHYLAAAHSEYCNSLRLTGSALCTFAAGEPLAVSDDIPAVFVNAPKQNMYHPPPPPSPPPPAATVTTSKIPNASETRHRKPPRKLPHILSESSLCSTPRSEFPNWFFPTAHQTLSTASETSSVWNWENFHPPPSPPSSEYFRQRSQPPNHNPECSSFEVPGSDSSSETFYNTIHSKLHLPNREIKTIKVDSQNQHLRDRLCSEDTASERSEPEPDRSETEREEVRCSDWEDCYGSTSSSDREEVIARLRSSVKPESVTDGDIPAREDKKTGEELLEEKVMMKHKDLKEIVEVIKENFEKAAVAGDKLSEMLHISRAQLDRSFSQLKKIVYHSSNLLSRVNSSWTSKPPLAVKYRFDAGSLERPGGPKSLCSTLDRLLAWENKLCQEVKGRESVKIEHERKLSALQNQECKGGDDETKIDRTKATITRLQSLIIVTSQGVSTTSAAINDLRDSDLVPQLVELCHGIIYMWRSMHQYHETQSNIVQQVCGLVNRSSKGHSTSESHKQATRDLELALSAWHSSFIRIIKFQRDFILSIHGWFKLNLIPVTNDNNNIKTIEPSVAFSFCDEWKLALDRVPDTVASEAIKSFVNVVHVISVKQSQELKIKKKTDTAYKELEKKSSSLRNIEKKFYNSYSMVGIGIIPNSVDHIGQGLDARDPLAEKKLELEACQRRVEDEKMKHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFIEALESVCDRSYAIK* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5178 757 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Psa4g5178 757 MobiDBLite consensus disorder prediction 164 196 - -
Psa4g5178 757 MobiDBLite consensus disorder prediction 218 253 - -
Psa4g5178 757 Pfam Protein of unknown function (DUF632) 316 622 IPR006867 -
Psa4g5178 757 MobiDBLite consensus disorder prediction 169 196 - -
Psa4g5178 757 PANTHER UNCHARACTERIZED 134 757 - -
Psa4g5178 757 PANTHER UNCHARACTERIZED 1 131 - -
Psa4g5178 757 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 1 131 - -
Psa4g5178 757 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 134 757 - -
Psa4g5178 757 Coils Coil 688 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5178 Psa-Chr4 444185779 444190254 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5178 1 87 Acyl Lipid Metabolism Gene Families AT2G27090 31.250 5.51e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5178 - - gmx:100792843 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5178 4 444185779 444190254 Psa4g5178 4 444185779 444190254 ECH
Psa4g5178 4 444185779 444190254 Psa3g2292 3 199418722 199423102 PCT