Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2292 ATGGAGATGAAGATGGTGGTGAGACATAGAGATTTGAAGGAGATTGTGGATTCGATAAAGGAGAATTTTGAAAAAGCTGCTGTTGCTGGAGATCAAGTTTCTGAGATGCTTGAGATTAGTAAAGCTCAGCTTGATCGAAGTTTCAGGCAATTAAGGAAAACTGTGTATCACTCAAATAGTCTATTGAGCAGCCTGAGCTCAACTTGGACATCAAAACCACCCTTGGCGGTGAAGTACCGGCTCGAGCCAGGTTCGTTGGATGAACCGGGCGGTCTGAAGAGTCTTTGCTCCTCTTTGGAACGGCTTTTGGCTTGGGAGAAGAAGCTCTACGATGAAGTCAAGTCTAGAGAAGGTGTGAAGATTGAGCATGAAAAGAAACTGTCAGCTCTTCAGAGTCAGGAATACAAAGGAGACGATGAAGCAAAGATATTCAAAACCAAGACTTCCATAAATAAGTTGCAGTCACTAATCGTTGTTACATCACAAGCTGTGTCTACCACCTCGACCGCTATTGTTGGCCTTAGAGACTCCGATCTTGTTCCTCAGCTTGTTGAACTCTGTCATGGAATGATGTACATGTGGAGATCAATGCATCAGTACCATGAAGTCCAAAGCAACATAGTTCAGCAAGTCCGCGGCCTGGTGAATAGATCGGGAGGAGGCGATTCAACTTCTGAACTGCACAGGCAGGCAACTCGTGACCTTGAATCTGCTGTCTCGGCTTGGCACTCGAGTTTTTGTCGCCTTATAAAATTTCAACGAGACTTTATTCTCTCCTTGCATGGTTGGTTTAAGCTTAGTCTTATTCCGGTCGATAATGATAACGTCAACAGGATGGAACACTCCGACGCGTACATGTTTTTTGATGACTGGAAGCTTGCACTTGACCGTGTCCCTGATACCGTTGCGTCTGAAGCCATCAAAAGCTTTATCAATGTTGTCCATGTGATATCTTCCAAGCAAGCCGAAGAACTCAAGATAAAGAAGCGAACCGAGAACGCGTCCAAGGAACTCGAGAAAAAGGCTTCGTCTGTACGGAATATAGAAAGAAAGTTTTACAGCTCGTATTCTTTGGTAGGGATTAGCCTTCCCGACTCCGCGCCTGATAACGGACAAGGCTTAGACGCGCGCGATCCACTCGCCGAGAAAAAACTAGAACTAGCTACCTGCCAAAGACGCGTCGAAGATGAAATGATGAAGCATTCGAAAGCCGTAGAGGTAACAAGAGCAATGACACTCAACAACCTACAGACAGGCTTGCCCGGAGTCTTTCAAGCATTGACCAGTTTTTCGTCGTTGTTCACCGAGGCTCTCGACTCGGTGTGTACTCGCTCGTACGCCATCAAATAG 1350 0.4593 MEMKMVVRHRDLKEIVDSIKENFEKAAVAGDQVSEMLEISKAQLDRSFRQLRKTVYHSNSLLSSLSSTWTSKPPLAVKYRLEPGSLDEPGGLKSLCSSLERLLAWEKKLYDEVKSREGVKIEHEKKLSALQSQEYKGDDEAKIFKTKTSINKLQSLIVVTSQAVSTTSTAIVGLRDSDLVPQLVELCHGMMYMWRSMHQYHEVQSNIVQQVRGLVNRSGGGDSTSELHRQATRDLESAVSAWHSSFCRLIKFQRDFILSLHGWFKLSLIPVDNDNVNRMEHSDAYMFFDDWKLALDRVPDTVASEAIKSFINVVHVISSKQAEELKIKKRTENASKELEKKASSVRNIERKFYSSYSLVGISLPDSAPDNGQGLDARDPLAEKKLELATCQRRVEDEMMKHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALDSVCTRSYAIK* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2292 449 Pfam Protein of unknown function (DUF632) 12 315 IPR006867 -
Psa3g2292 449 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 2 449 - -
Psa3g2292 449 PANTHER UNCHARACTERIZED 2 449 - -
Psa3g2292 449 Coils Coil 328 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2292 Psa-Chr3 199418722 199423102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2292 94 264 Acyl Lipid Metabolism Gene Families AT2G27090 37.356 8.84e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2292 - - gmx:100815888 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2292 3 199418722 199423102 Psa3g2292 3 199418722 199423102 ECH
Psa4g5178 4 444185779 444190254 Psa3g2292 3 199418722 199423102 PCT