Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4707 ATGGGGTGTTTTGATGAGGGGCATTTCAATGGTGAGCTTGAAAATGGAGTGAGTATTGGGTATGGTGAGATTGAGGATGATGCAAATAAAGTTGCTATTGAGGATGCTGTGAAGGTTCTTTTGTTGGGTCTTGGTGAAGATATTAATAGGGAAGGTCTTAAGAAAACACCACTTCGTGTTGCAAAAGCTTTACTTGAAGGAACTAGAGGTTATAGACAAAAGGTGAAGGATATTGTTGAAGGTGCTTTATTTCCTGAAGCTGGCCTAGATAATAATAAAATTGGCCATGCTGGCGGTGCAGGCGGACTTGTGATTGTCCGAGACATTGACCTCTATTCCTACTGTGAATCTTGCTTGCTACCTTTCCAGGTCAAATGTCATGTCGGTTATGTCCCTTCTGGCCAAAGAGTTGTTGGATTAAGCAAGCTCTCTCGTGTAGCCGAAGTGTTTGCTAAACGTCTTCAAGAGCCTCAGCGTCTAGCAGACGAGGTGTCTTCGGCTTTGCAACAGGGAATAAAACCGGCAGGCGTTGCCGTTTTACTTCAGTGTACACATATTCACTTTCCAGACATCGAATCAATCTTTCTAGAATCAAACCAAAAAGGATGGGGGAAGATAGATGTTTCATCGGGTTCTGGTGTCTTCGAAAACAAAAACGCAGACGAATGGTCTGATTTCTTTTACCTTATTAAATCTAGAGGTGTTGATATGGAAACAATTCATCTTCGAGGTTCGTCTGACCAATGCTGGTGTCCGTCTCTCTCCACCATTTCCACTAAAGTTTCCTCCAAAATCGGACCGATCAATCCGTCAATGGTCACCGCAGTATCATCAATTCTAAAATCTTTGGGAGAAGATTCGGTTCGGAAGGAGCTTGCAGGGACACCGAACCGTTTCGTGAAATGGCTGTTGAACTTCCAAAGCATAGACATGGATGTGAAGCTAAACGGCTCCCTTTGTTGCGGGATAAAACCTTTGATTGCCGCCAGCGAGGTGGCAAACAACATCGACAAACAAATATACACCGAGTTGAACTTGCCGTTTTGGTCACAATGTGAGCATCATATACTTCCATTTCACGGCGTCGTTCACATAGGATACTTCCTTTCAGAAGGGTTCAATCCAATAGGAAAATCACTTCTACAGTCAATAGTTCATTTTTACGGTTTCAAGCTCCAAGTTCAAGAAAGACTTACGAAGCAGATAGCAGAAACCGTATCGCCGCTTTTAGGTGGAAATGTAATAGTAGTAGTAGAAGCAAGTCACACATGCATGATTTCTAGAGGAATTGAGAAGTTCGGAAGCAGTACAGCTACCATTGCTGTGTTAGGATGCTTTTCAAATGACCTTGCTTCAAGAACCTCATTCTTGCAAAGTATTGCAAATGCTTCTTCTTCTGGATTGCAATAG 1410 0.4277 MGCFDEGHFNGELENGVSIGYGEIEDDANKVAIEDAVKVLLLGLGEDINREGLKKTPLRVAKALLEGTRGYRQKVKDIVEGALFPEAGLDNNKIGHAGGAGGLVIVRDIDLYSYCESCLLPFQVKCHVGYVPSGQRVVGLSKLSRVAEVFAKRLQEPQRLADEVSSALQQGIKPAGVAVLLQCTHIHFPDIESIFLESNQKGWGKIDVSSGSGVFENKNADEWSDFFYLIKSRGVDMETIHLRGSSDQCWCPSLSTISTKVSSKIGPINPSMVTAVSSILKSLGEDSVRKELAGTPNRFVKWLLNFQSIDMDVKLNGSLCCGIKPLIAASEVANNIDKQIYTELNLPFWSQCEHHILPFHGVVHIGYFLSEGFNPIGKSLLQSIVHFYGFKLQVQERLTKQIAETVSPLLGGNVIVVVEASHTCMISRGIEKFGSSTATIAVLGCFSNDLASRTSFLQSIANASSSGLQ* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4707 469 Gene3D - 331 463 IPR043133 -
Psa4g4707 469 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 267 461 - -
Psa4g4707 469 Gene3D - 97 234 IPR043133 -
Psa4g4707 469 Pfam GTP cyclohydrolase I 33 186 IPR020602 -
Psa4g4707 469 Pfam GTP cyclohydrolase I 274 460 IPR020602 -
Psa4g4707 469 PANTHER GTP CYCLOHYDROLASE I 1 465 IPR001474 GO:0003934|GO:0046654
Psa4g4707 469 Gene3D - 268 314 IPR043134 -
Psa4g4707 469 Gene3D - 23 78 IPR043134 -
Psa4g4707 469 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 7 231 - -
Psa4g4707 469 PANTHER GTP CYCLOHYDROLASE I 1 1 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4707 Psa-Chr4 416346087 416349270 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4707 K01495 - gmx:100780537 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3424 3 289407256 289410481 Psa4g4707 4 416346087 416349270 PCT