Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3424 ATGGGCTGTTTAGATGATGGGCGTTTCATCGTTGAGCTTGAAAATGGATTGAGTAACGGTTGTTCTGAAGTGGGAAAAGATGCTTCTGCCATTGAAGATGCTGTCAAGGTTTTGCTGCTGGGTCTAGGAGAAGATATTAACAGGGAAGGTATTAGGAAGACTCCACTCCGTGTTGCTAAGGCCCTTCGTGAAGGAACAAGAGGTTACAGGCAAAAGGTAAAAGACATTGTTGAAGGTGCTTTATTCCCCGAAGCTGGTCTTGATAACAGAGTTGGCCATGCTGGTGGAGCTGGCGGACTTGTGATCGTCCGAGATATTGACTTATTTTCCTATTGCGAGTCATGCATGCTTCCGTTCCAGGTTAAGTGTCACGTAGGTTATGTTCCTTCTGGCGAAAGAGTTATCGGTTTAAGCAAGCTATCTCGTGTTGCTGATGTATTTGCAAAACGACTCCAAGATCCTCAGCGCCTCGCAAATGAAGTGTGTTCTGCTTTGCATCATGGAATAAAGCCAGCTGGTGTTGCCGTCATACTTCAATGTACACATATCCACTTTCCAGACATAGAATCAATCTTTCTCGAATCAAACCACCAAGGATTGGTTAAGACACTCGTTTCCGCCGGTTCCGGGGTTTTTGAAAACAAAAATGCAGACGAATGGGCTGATTTCTTTAATCTCCTTAAATTTAGAGGTATCAGTCTGGAAAAAATCCATGTTAGAGGATCATTGGACTCCTCCTGGTGTCCTTCTCAGTCAGCCAAAGTTTCCTCCAAAATCGTACCGGTCAACCCTGCAATGGTCACTGCAGTAACTTCAGTTATTAAATCTTTGGGAGAAGATCCACTAAGGAAGGAGCTTAGAGGAACCCCAACTAGATTTGTGAAGTGGTTAATGAACTTTCAGAACAGCAACTTCGACATGAAGTTGAATGGTTTTCTCAATGGTGGAATAGATTCTTTAAGCGTGAACGAAAAGGTAGACATGGATAACAAGAAAATATGCTCTGAGCTGAACTTATCATTTTGGTCACAATGCGAGCACCATTTACTTCCATTTCACGGTGTTGTTCACATAGGTTACCTCCTATCAGATGGATTCAGTCCGATCGGAAAATCTCTTTTACAATCCATAGTACATTTTTACGGTTTCAAGCTTCAAGTTCAGGAGAGGCTTACAAGACAGATAGCTGAAACGATTTCGCCGCTGATCGGTGGAGATGTGATAGTTGTTGTAGAGGCAAGCCACACATGTATGATTTCTAGGGGTATTGAAAAATTTGGAAGTAGTACTGCCACTATTGCTGTTTTAGGACGATTCTCGACCGACCTTAAGACAAGGGCTTCCTTCTTGCAGGGTATTCCAAGTTCTACATATTTTTAG 1380 0.4283 MGCLDDGRFIVELENGLSNGCSEVGKDASAIEDAVKVLLLGLGEDINREGIRKTPLRVAKALREGTRGYRQKVKDIVEGALFPEAGLDNRVGHAGGAGGLVIVRDIDLFSYCESCMLPFQVKCHVGYVPSGERVIGLSKLSRVADVFAKRLQDPQRLANEVCSALHHGIKPAGVAVILQCTHIHFPDIESIFLESNHQGLVKTLVSAGSGVFENKNADEWADFFNLLKFRGISLEKIHVRGSLDSSWCPSQSAKVSSKIVPVNPAMVTAVTSVIKSLGEDPLRKELRGTPTRFVKWLMNFQNSNFDMKLNGFLNGGIDSLSVNEKVDMDNKKICSELNLSFWSQCEHHLLPFHGVVHIGYLLSDGFSPIGKSLLQSIVHFYGFKLQVQERLTRQIAETISPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPSSTYF* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3424 459 Gene3D - 322 455 IPR043133 -
Psa3g3424 459 Gene3D - 94 230 IPR043133 -
Psa3g3424 459 Gene3D - 22 76 IPR043134 -
Psa3g3424 459 Gene3D - 261 304 IPR043134 -
Psa3g3424 459 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 264 454 - -
Psa3g3424 459 Pfam GTP cyclohydrolase I 31 183 IPR020602 -
Psa3g3424 459 Pfam GTP cyclohydrolase I 268 453 IPR020602 -
Psa3g3424 459 PANTHER GTP CYCLOHYDROLASE I 16 457 IPR001474 GO:0003934|GO:0046654
Psa3g3424 459 PANTHER GTP CYCLOHYDROLASE I 1 16 457 - -
Psa3g3424 459 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 25 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3424 Psa-Chr3 289407256 289410481 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3424 K01495 - gmx:100816351 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3424 3 289407256 289410481 Psa4g4707 4 416346087 416349270 PCT