Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4662 ATGAAAGGTGTCAAAATCTGTTCAAACTCTATTCAAACAATGATGATCTTTCTTCTAATCATCATATCAAGACTTTGTCTAAGCATCGAAGCTTCCACATGCAAACCAAATGGAAGAATAATAGGCAAAAAGCTCAAATCAGGACAGTGCAATAGAGGTGAAGAATCTAACTGCTGCAAACCAGGAAAGCCCTACACAACCTTCAAGTGTTCACCGCAAGTTTCGCGCCACACGAAAGCAACGTTAACACTCAACAGCTTTGAGAAAGGTGGAAGTGGAGGATCAGCATCGGCATGCGACAACAATTTTCACTCTGACAACACACCTGTCGTGGCGCTATCAACTGGTTGGTTGAACAATCACAGGAGGTGTTTGAAGAAGATTGTTATATTTGGGAATGGTAAGAGGGTGAAGGCTTTGGTTGTTGATGAGTGTGATTCTACTAAAGGGTGTGATGCTGAGCATGATTTTCAGCCTCCTTGTTCGAATAATATCGTGGATGGTTCTGCTGCTGTTTGGAAGGGTTTGGGTGTGCCTGAGAAAGATTGGGGTGAACTGGAAGTTTTTTGGTCAGATGCTTGA 582 0.4278 MKGVKICSNSIQTMMIFLLIIISRLCLSIEASTCKPNGRIIGKKLKSGQCNRGEESNCCKPGKPYTTFKCSPQVSRHTKATLTLNSFEKGGSGGSASACDNNFHSDNTPVVALSTGWLNNHRRCLKKIVIFGNGKRVKALVVDECDSTKGCDAEHDFQPPCSNNIVDGSAAVWKGLGVPEKDWGELEVFWSDA* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4662 193 PANTHER RIPENING RELATED PROTEIN FAMILY 11 193 - -
Psa4g4662 193 SUPERFAMILY Barwin-like endoglucanases 75 191 IPR036908 -
Psa4g4662 193 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 11 193 IPR039271 -
Psa4g4662 193 Gene3D - 78 192 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4662 Psa-Chr4 413441700 413442630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4662 - - rcn:112181282 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2542 3 214843949 214845365 Psa4g4662 4 413441700 413442630 PCT