Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2542 ATGGAGTGCTTCTTCTCAAATACATTCATTTTTCTCTTACTCTTTTTCTTCTTGACAAATTCTCTATGCATTAAAGCTCAAAAATGTCACCCTAATGGTATCGTAAAAGGTAAAAGCCCTTCCGGGCATTGCAGTCACGAGAATGACTTATGTTGTGTACCAGGTAAGAAATATCACACGTACAAATGTTCACCACTGGTGTCTAGTCACACGAAGGCATATCTCACTCTTAACAGTTTTGAAAAAGGTGGAGATGGTGACGGCCCTTCAACATGTGATGGCAAATATCATTCCGATGAAACGCCGGTGGTGGCACTATCCACTGGATGGTTCAACACTAAGAGAAGGTGCCTTCATAATATCACCATAAATGGGAATGGTCAAAGTGTGGTTGCAATGGTAGTTGATGAGTGTGACTCATCAAAGGGGTGTGATGCAAAACATAATTATCAACCACCATGTGCCAATAATATTGTTGATGCTTCAATGGCTGTGTGGAAAGCCTTAGGTGTCCCTAGGAACCAATGGGGTGGGTTGGATATTACATGGTCAGATGTTTGA 561 0.4153 MECFFSNTFIFLLLFFFLTNSLCIKAQKCHPNGIVKGKSPSGHCSHENDLCCVPGKKYHTYKCSPLVSSHTKAYLTLNSFEKGGDGDGPSTCDGKYHSDETPVVALSTGWFNTKRRCLHNITINGNGQSVVAMVVDECDSSKGCDAKHNYQPPCANNIVDASMAVWKALGVPRNQWGGLDITWSDV* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2542 186 Gene3D - 74 186 IPR036908 -
Psa3g2542 186 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 6 185 IPR039271 -
Psa3g2542 186 SUPERFAMILY Barwin-like endoglucanases 62 186 IPR036908 -
Psa3g2542 186 PANTHER LIPID TRANSFER PROTEIN 6 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2542 Psa-Chr3 214843949 214845365 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2542 - - vun:114185151 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2542 3 214843949 214845365 Psa3g2542 3 214843949 214845365 ECH
Psa3g2542 3 214843949 214845365 Psa4g4662 4 413441700 413442630 PCT