Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3620 ATGGTTTCATTGGAAGCTATATATAGTGTTGCTTATGTGTTCTTACTTGGTGTCTCTTTGGTTTTGGCTGGTGATATTGTTCATCATGATGATGTTGCTCCCACAAGGCCTGGCTGTGAGAACAACTTTGTTCTGGTCAAAGTTCCAACTTGGATCGATGGCGTGGAAAACGATGAGTATGTTGGTGTCGGTGCGAGGTTCGGTCCTACGTTAGAATCAAAAGAAAAACATGCCACTCATACCAGAGTTGTCATGGCTGATCCTCCTGATTGTTGTAGCAAGCCTAAGAATAAGCTCACCAGTGAGATCATTTTGGTGCACCGAGGAAAATGTAGCTTCACAACCAAGGCAAATATAGCTGATGAAGCCGGTGCTTCGGCCATTCTCATTATAAACAATCGTACAGAACTTTTCAAGATGGTTTGTGAGTTATACTCTCCACTTCGTCCATTGGTTGATGTTGCGGAAGTGTTTCTATGGCTCATGGCTGTTGGTACCATTTTATGTGCTTCTTATTGGTCTGCTTGGACTGCAAGAGAAGCTGTTATTGAGCAAGACAAGCTTTTAAAGGATGCTTCAGAAGAATATGTTGCAGAAAGTGTTGGTTCCCGTGGTTACGTGGAAATCAGTACCACAGCAGCGATTTTATTCGTGGTGCTTGCTTCTTGTTTCTTGGTTATGCTGTACAAATTAATGTCATTCTGGTTTGTTGAAGTTTTGGTGGTTCTATTTTGCATTGGTGGGATAGAGGGACTGCAAACTTGTTTGGTGGCTCTATTATCATGTTTCAGATGGTTTCAACGTCCGGCGCAAACATATGTGAAGATACCGTTCTTTGGAGCTGTTCCATATCTGACACTTGCTATTACTCCATTCTGCATAGTGTTTGCGGTTGTTTGGGCAGTTAAACGCCATGAGTCATATGCGTGGATTGGTCAAGATATTCTTGGTATCGCGTTGATAATTACAGTTCTTCAAATTGTCCGCATTCCAAATCTCAAGGTTGGGACTGTTCTTCTAAGTTGTGCTTTCCTATATGACATCTTATGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGATGGTATTCCCATGCTTCTCAAATTACCACGTTTATTTGATCCTTGGGGTGGTTACAGCATCATCGGTTTCGGGGACATAATCTTACCGGGACTTCTAGTAGCATTTTCACTAAGATACGATTGGTTGGCAAAGAAAAACCTTCGAGCCGGATACTTTGTATGGGCTATGACTGCTTATGGTTTAGGTCTCCTTGTCACATATGTGGCTTTAAACTTGATGGATGGACATGGCCAGCCAGCTTTGCTTTATATAGTCCCATTTACACTTGGAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGATCTGAAGATTTTATGGACAAGAGGAGAACCAGAAAGGCCTTGTCCACATATTCAACAAGTTAACCAACCAATCAATTAA 1506 0.4203 MVSLEAIYSVAYVFLLGVSLVLAGDIVHHDDVAPTRPGCENNFVLVKVPTWIDGVENDEYVGVGARFGPTLESKEKHATHTRVVMADPPDCCSKPKNKLTSEIILVHRGKCSFTTKANIADEAGASAILIINNRTELFKMVCELYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAVIEQDKLLKDASEEYVAESVGSRGYVEISTTAAILFVVLASCFLVMLYKLMSFWFVEVLVVLFCIGGIEGLQTCLVALLSCFRWFQRPAQTYVKIPFFGAVPYLTLAITPFCIVFAVVWAVKRHESYAWIGQDILGIALIITVLQIVRIPNLKVGTVLLSCAFLYDILWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKLPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRAGYFVWAMTAYGLGLLVTYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGDLKILWTRGEPERPCPHIQQVNQPIN* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3620 501 Pfam Signal peptide peptidase 205 485 IPR007369 GO:0004190|GO:0016021
Psa4g3620 501 PANTHER SIGNAL PEPTIDE PEPTIDASE 144 501 IPR007369 GO:0004190|GO:0016021
Psa4g3620 501 PANTHER SIGNAL PEPTIDE PEPTIDASE 6 143 IPR007369 GO:0004190|GO:0016021
Psa4g3620 501 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 6 143 - -
Psa4g3620 501 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 144 501 - -
Psa4g3620 501 SUPERFAMILY PA domain 99 138 IPR046450 -
Psa4g3620 501 Gene3D - 39 147 - -
Psa4g3620 501 SMART psh_8 205 474 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3620 Psa-Chr4 304307269 304310861 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3620 K09597 - gmx:100779540 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3620 4 304307269 304310861 Psa4g3620 4 304307269 304310861 ECH
Psa3g2509 3 212667514 212671644 Psa4g3620 4 304307269 304310861 PCT