Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2509 ATGGTTTTGTTTCGTTTTTCTACTGATTTCACTGTGTTCTTCTATGTGTTCGTGCTTCTTCTCGGTATGAGTTTTGCTGGTGATATAGTACACCATGATGATTCTTCCCCCAAGAGGCCTGGATGTGAAAACAACTTTGTTCTGGTTAAAGTTCCAACTTGGATTGATGGCGTGGAAAGTGGCGAATATGTCGGTGTTGGTGCAAGATTTGGCCCTACATTGGAATCGAAAGAAAAGCGCGCTAACCATACTAGAGTTGCCATTGCAGACCCTCCTGATTGTTGTAGCAAGCCTAAGAATGAGCTCACGGGCGAGGTCATTTTGGTGCACCGAGGACAATGTAGTTTCACAACCAAGGCAAATATAGCTGAAGAAGCCGGTGCTTCGGCCATCCTGATTATAAATAACCGTGCAGAACTTTTCAAGATGGTTTGTGAAAAGAATGAAACAGATGTTGATATTGGAATACCTGTTGTCATGCTTCCACAGGATGCCGGTGAAACCGTCGAAAATTATATACAAAACAAGTCCACAGTGTCTGTGCAGTTATACTCTCCACGGCGTCCAACTGTCGATGTTGCGGAAGTATTTTTATGGCTTATGGCTGTTGGTACCATTATCTGCGCGTCTTACTGGTCTGCCTGGACAGCCAGAGAGGACGTTATCGAGCGCGAGAAGCTATTGAAGGATGATTCAGATGAGTATTTAAATACAGCGAATGCTGGTTCGAGTCCTTATTTGGAAATAAGTACCACAGCGGCAGTTTCATTCGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTCTACAAACTAATGGCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTATTTTGCATTGGAGGGGTTGAGGGACTGCAAACTTGCTTGGTAGCTCTTTTATCATGTTTCGGCTGGTCTCAACGTGCTGCACAGACATACGTGAAAATACCTTTCTTCGGTGCTGTTTCATATCTCACGCTTGCCGTTACTCCCTTTTGCATAGTGTTTGCTGTGGTTTGGGGAGTTAAACGCCGTGTATCGTATGCTTGGATTGGTCAAGATATTCTTGGCATTGCTTTGATAATTACAGTTCTTCAGATTGTCCAAATACCAAATCTCAAGGTTGGAACTGTTCTTCTCGGTTGTGCCTTCATATATGACATCTTCTGGGTGTTTGTCTCTAAATTAGTATTCCATGAGAGTGTGATGATAGTGGTAGCTCGCGGTGATAGGAGTGGAGAAGATGGTATTCCAATGTTGCTCAAGATACCTCGTTTGTTTGATCCTTGGGGTGGTTACAGTGTCATTGGTTTTGGGGACATAATCTTACCAGGGCTTCTAGTAGCCTTTTCATTAAGGTATGATTGGTTAGCGAAGAGGAACATTCGATCAGGATACTTCTTGTGGGCGATGAGTGCTTATGGTTTAGGTCTCCTTGTCACATACCTGGCTTTGAATTTGATGGATGGACATGGTCAACCAGCTTTGTTGTATATAGTGCCATCTACACTTGGAACCTTTTTGACATTGGGAATGACGAGAGGTGAACTCAAGATTTTGTGGACAAGAGGGCAACCAGAAATGCCTTGTCCTCACATCCAAGAGAATTCTCAACCAATGGACCAGTAA 1629 0.434 MVLFRFSTDFTVFFYVFVLLLGMSFAGDIVHHDDSSPKRPGCENNFVLVKVPTWIDGVESGEYVGVGARFGPTLESKEKRANHTRVAIADPPDCCSKPKNELTGEVILVHRGQCSFTTKANIAEEAGASAILIINNRAELFKMVCEKNETDVDIGIPVVMLPQDAGETVENYIQNKSTVSVQLYSPRRPTVDVAEVFLWLMAVGTIICASYWSAWTAREDVIEREKLLKDDSDEYLNTANAGSSPYLEISTTAAVSFVVIASCFLVMLYKLMAFWFVEVLVVLFCIGGVEGLQTCLVALLSCFGWSQRAAQTYVKIPFFGAVSYLTLAVTPFCIVFAVVWGVKRRVSYAWIGQDILGIALIITVLQIVQIPNLKVGTVLLGCAFIYDIFWVFVSKLVFHESVMIVVARGDRSGEDGIPMLLKIPRLFDPWGGYSVIGFGDIILPGLLVAFSLRYDWLAKRNIRSGYFLWAMSAYGLGLLVTYLALNLMDGHGQPALLYIVPSTLGTFLTLGMTRGELKILWTRGQPEMPCPHIQENSQPMDQ* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2509 542 SUPERFAMILY PA domain 101 146 IPR046450 -
Psa3g2509 542 SMART psh_8 245 514 IPR006639 GO:0004190|GO:0016021
Psa3g2509 542 Gene3D - 42 186 - -
Psa3g2509 542 Pfam Signal peptide peptidase 247 524 IPR007369 GO:0004190|GO:0016021
Psa3g2509 542 PANTHER SIGNAL PEPTIDE PEPTIDASE 13 541 IPR007369 GO:0004190|GO:0016021
Psa3g2509 542 Pfam PA domain 92 168 IPR003137 -
Psa3g2509 542 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 13 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2509 Psa-Chr3 212667514 212671644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2509 K09597 - gmx:100808921 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2509 3 212667514 212671644 Psa3g2509 3 212667514 212671644 ECH
Psa3g2509 3 212667514 212671644 Psa4g3620 4 304307269 304310861 PCT