Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3594 ATGGACAATTCGTCGAATTTCGACTCAACTTCTTCTGTGGATCAGAATGATCATTCAGTCAGTGAAACTCCTGAGTATTCGCCATTCAGCAGAGACTCTTTCGCGTATTGTCGGACTAATTCGGAGGTTTCGAACTTATCCGAGGCTGTTGATGACAATAGTTACGCCAGTGACCGTTCGCCTTCGCCGTGGATGAGTGCGAAACACGGAGCTGTTCTTTCGAGATTAGGGATGAAGCAGAGAAAGCATTCATTGGATGGTAAATCTGATGATTTGGATATCTTGGAATCAGAGCTTGAAATGATGAAGGAAAGATTTTCTAAGCTGCTTTTGGGGGAAGATATGTCTGGTGGTGGTAAAGGCGTTTGCACTGCGGTTACAATATCGAATTCGATCACCAATCTCTATGCAACTGTATTTGGACAAAATTTGAAGTTGGAGCCTCTAAAGCCTGAGAAGAAAGCTATGTGGAAAAGAGAAATGAATTGTCTTATGTCTGTTTGTGATTACATAGTAGAATTTGCACCAACTGCACAATACTTGGATGATGGCACAATTGTGGAGATGATGACGAGTAGACCGAGGTCGGATATTTATATCAACCTTCCAGCTCTACAGAAGCTTGACACAATGCTCATAGAAATATTTGATAGTTTCCAGGATACTGAATTCTGGTATGCAGAACAAGGGAGCATATCAGGAAACTCGAACCGCAGTTCGCGTTCGAACGCGGGCTCGTTTCGGATCATTGCTCAAAGAAAAGACGAGAAGTGGTGGTTGCCAGTTCCTTGCGTTCACACCGGTGGCATCTCTGATAAGTCGAGGAAGCATTTGATTGAGAAAAGAGATTGTGCTAATCAAATTCATAAAGCCGCTATGGCAATAAATAGCAGTGTTCTTGCTGAGATGGATATTCCTGAAACATACATGGCAAATCTTCCTAAGAGCGGAAGATCGAGTCTCGGGGACCCGATTTATCGGTACATGCATTCTACAGACAAGTTTTCACCCGGAAACCTTCTCGACTGTCTCAAAATAAGTACCGAACACGAAGCACTTGAACTAGCAGATAGAGTTGAATCTTCGATGTACACATGGAGACGAAAAGCTTGCTTAAGCCATTCAAAATCATCATGGAACAAAGTAAAAGCTCATATGGCTGACACCGATCAAAATGACAAAAACTATGTCTTAGCCGAAAGAGCCGAGACTTTGTTGTTTTTCTTGAAACAAAGATATCCTGAACTTTCACAAACTTCCTTGGACACATGCAAGATTCAATACAATCAGGATGTAGGAAAAGCAATACTAGAAAGCTACTCAAGAGTGTTAGAAGGATTAGCATTCAATATTGTTGCTTGGATTGAAGATGTTCTTTGTGCAGATAAATCTATGAGGAACTAA 1404 0.4152 MDNSSNFDSTSSVDQNDHSVSETPEYSPFSRDSFAYCRTNSEVSNLSEAVDDNSYASDRSPSPWMSAKHGAVLSRLGMKQRKHSLDGKSDDLDILESELEMMKERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMNCLMSVCDYIVEFAPTAQYLDDGTIVEMMTSRPRSDIYINLPALQKLDTMLIEIFDSFQDTEFWYAEQGSISGNSNRSSRSNAGSFRIIAQRKDEKWWLPVPCVHTGGISDKSRKHLIEKRDCANQIHKAAMAINSSVLAEMDIPETYMANLPKSGRSSLGDPIYRYMHSTDKFSPGNLLDCLKISTEHEALELADRVESSMYTWRRKACLSHSKSSWNKVKAHMADTDQNDKNYVLAERAETLLFFLKQRYPELSQTSLDTCKIQYNQDVGKAILESYSRVLEGLAFNIVAWIEDVLCADKSMRN* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3594 467 Gene3D PRONE domain, subdomain 1 336 467 - -
Psa4g3594 467 Gene3D PRONE domain, subdomain 1 92 335 - -
Psa4g3594 467 Coils Coil 85 105 - -
Psa4g3594 467 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 315 - -
Psa4g3594 467 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 314 467 - -
Psa4g3594 467 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 315 IPR038937 GO:0005085
Psa4g3594 467 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 314 467 IPR038937 GO:0005085
Psa4g3594 467 ProSiteProfiles PRONE domain profile. 89 467 IPR005512 GO:0005085
Psa4g3594 467 MobiDBLite consensus disorder prediction 1 28 - -
Psa4g3594 467 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 97 466 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3594 Psa-Chr4 302674577 302677403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3594 - - gmx:100785956 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2516 3 213198452 213201980 Psa4g3594 4 302674577 302677403 PCT