Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3547 ATGATTGAAGAATTGATGGATCAAACAGATTACGCAGGACCTTCTACTCAACCATTAAATGATGATTTGCCTCGTAGAGTGTCTACGCGATTTGGACAATGTCCTGATTGTGGAACCGACCATCGGTATGCAGTGGTGACTGGATCAAATAAAGGAATTGGATTTGAGATAGTGAGGCAGTTAGCTTCATCTGGAATCAAAGTGGTGCTTACAGCAAGAGATGAACAAAGAGGTCTTCAAGCTTTGGAAACACTCAAAGCTTCTGGTTTATCTCATTCTGTTGTTTTTCATCAACTAGATGTTGCTGATGCTGCTAGTGTAGCTACTCTCGCAGATTTTCTCAAATCACAATTCGGCAAACTTGATATTCTGGTTAACAATGCTGGAATTGGCGGAGTTGAAATTAAAGACCGTGATTTATTCACTTCAACAATCATTACAAAAGGGGCACTATCTGATGATGAATTGAGAAGGACAATGACACAATCATATGAGTCAACTAAAGAATGCTTAGAGATAAATTATCATGGTGCTAAGAGAACATTTGAATGTCTTCTTCCCCTACTCCAGTTATCAGATTCACCGAGAGTAGTCAATGTTTCAGGAACACTGGGCAAGATAGAGTGTGTATCAAATGAATGGGCTAAAGGAGTGTTCAATGATGTTGATAACCTTACAGAAGAGAAAATAGATGAAGTGTTAAAGGAATTTATCAAGGATTTCGAACAAGGGTCTTTAGAAAGAAAAGGTTGGCCTAGGTATTTCGCTTCCTATATTGTTGCTAAAGCTTCAATGAATGCTTATACAAGAATTATTGCAAAGAAGTATCCAAATTTCTGCATCAATTGTGTTTGTCCTGGTTATGTGAAGACAGATATAACTGCTAATACTGGTTTCTTCACTACAAAAGAAGGTGCTGCTCATCCTGTTAGGCTAGCATTGCTTCCCAACGGTAGTCCATCTGGCCTCTACTATATTCGAAATGAACTATCTTCATTTTGA 1002 0.3822 MIEELMDQTDYAGPSTQPLNDDLPRRVSTRFGQCPDCGTDHRYAVVTGSNKGIGFEIVRQLASSGIKVVLTARDEQRGLQALETLKASGLSHSVVFHQLDVADAASVATLADFLKSQFGKLDILVNNAGIGGVEIKDRDLFTSTIITKGALSDDELRRTMTQSYESTKECLEINYHGAKRTFECLLPLLQLSDSPRVVNVSGTLGKIECVSNEWAKGVFNDVDNLTEEKIDEVLKEFIKDFEQGSLERKGWPRYFASYIVAKASMNAYTRIIAKKYPNFCINCVCPGYVKTDITANTGFFTTKEGAAHPVRLALLPNGSPSGLYYIRNELSSF* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3547 333 MobiDBLite consensus disorder prediction 1 24 - -
Psa4g3547 333 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 42 333 - -
Psa4g3547 333 Gene3D - 34 333 - -
Psa4g3547 333 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 130 IPR002347 -
Psa4g3547 333 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 195 203 IPR002347 -
Psa4g3547 333 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 258 277 IPR002347 -
Psa4g3547 333 PRINTS Glucose/ribitol dehydrogenase family signature 43 60 IPR002347 -
Psa4g3547 333 PRINTS Glucose/ribitol dehydrogenase family signature 119 130 IPR002347 -
Psa4g3547 333 PRINTS Glucose/ribitol dehydrogenase family signature 189 205 IPR002347 -
Psa4g3547 333 PRINTS Glucose/ribitol dehydrogenase family signature 258 277 IPR002347 -
Psa4g3547 333 PRINTS Glucose/ribitol dehydrogenase family signature 277 294 IPR002347 -
Psa4g3547 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 42 319 IPR036291 -
Psa4g3547 333 Pfam short chain dehydrogenase 43 207 IPR002347 -
Psa4g3547 333 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 42 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3547 Psa-Chr4 299163561 299169317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3547 15 298 Acyl Lipid Metabolism Gene Families AT1G24360 21.034 5.01e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3547 K15095 - gmx:102663482 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3547 4 299163561 299169317 Psa4g3547 4 299163561 299169317 ECH
Psa4g3547 4 299163561 299169317 Psa3g2572 3 216352746 216354422 PCT