Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa4g2190 | ATGGGATCATCTTGGACTCCAAGGCAAAACAAACAGTTTGAAAGAGCTTTGGCTGTATACGACAGAGAAACTCCAGATAGGTGGCAGAATGTTGCTAACATGGTTGGAAAATCAATTGAAGATGTTAAAAGACATTATGAGATCCTCAAAGAAGATGTTAGGCGCATTGAACATGGTCAAGTTGCATTCCCTTACAGAACAAACAATAACTGA | 213 | 0.3897 | MGSSWTPRQNKQFERALAVYDRETPDRWQNVANMVGKSIEDVKRHYEILKEDVRRIEHGQVAFPYRTNNN* | 71 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa4g2190 | 70 | SUPERFAMILY | Homeodomain-like | 3 | 57 | IPR009057 | - | |
| Psa4g2190 | 70 | ProSiteProfiles | SANT domain profile. | 1 | 54 | IPR017884 | - | |
| Psa4g2190 | 70 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 69 | - | - | |
| Psa4g2190 | 70 | SMART | sant | 1 | 52 | IPR001005 | - | |
| Psa4g2190 | 70 | CDD | SANT | 4 | 50 | IPR001005 | - | |
| Psa4g2190 | 70 | Gene3D | - | 1 | 63 | - | - | |
| Psa4g2190 | 70 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 1 | 69 | IPR044636 | GO:0003700 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa4g2190 | Psa-Chr4 | 176867574 | 176868338 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa4g2190 | - | - | lja:Lj4g3v0973380.1 | 130.568 |
Event-related genes