Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3610 ATGGCATCTTGGACTGCAAGACAAAACAAATTATTTGAAGAGGCACTTGCTATATATGACAGGGACACACCTGACAAGTGGCACAATGTCGCTAAAGTGGTCGGAAAATCCGTTGAGGATGTTAAAAGGCATTATGAAGTACTCAAAGAAGATATCAGGCGCATTGAGCGTGGTGAAGTTCCTTTTCCTTATAAAGGTTCATGA 204 0.4118 MASWTARQNKLFEEALAIYDRDTPDKWHNVAKVVGKSVEDVKRHYEVLKEDIRRIERGEVPFPYKGS* 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3610 67 CDD SANT 3 49 IPR001005 -
Psa2g3610 67 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 64 IPR044636 GO:0003700
Psa2g3610 67 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 64 - -
Psa2g3610 67 Gene3D - 1 62 - -
Psa2g3610 67 SMART sant 1 51 IPR001005 -
Psa2g3610 67 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Psa2g3610 67 Coils Coil 38 58 - -
Psa2g3610 67 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3610 Psa-Chr2 390444810 390445547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3610 - - pvu:PHAVU_003G254400g 114.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3610 2 390444810 390445547 Psa4g2190 4 176867574 176868338 PCT