Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1832 ATGAAAACAAGAAAAGGAAAACGCTCAGAGGTGTTTTGGCCCTCCATAGTGATGAAGAAATGGTTGAATATAAAGCAAAAAGTGTGCGATTTTAGCGAAGATGAAGCGGATACTGAAACTGAGAGTGAAGATGATAATGATACATGTTGCAAGGACTACAAGGCGAGACGACACAGAAGAGGAAAATCAGAAACTTTGCGTGCTCAGTACATAGATTCGAAGGAAGTGAGGGTAACAATTGGTACTTGGAATGTTGCTGGAGTATCTCCATGCAATGATCTTGAAATTGATGGCTGGCTTTGTACTCAAAAACCAGCAGATATTTACATTATTGGTTTTCAAGAGGTGGTTCCATTGAATGCTGGGAATGTGTTAGGAGCTGAAGATAACAAACCTATTTTGAAATGGGAAGAAATCATTAGAAGAACTCTAAACAAATCACCTGAATCTGTAACCAAACAGAAAAGTTATAGTGCACCTCCTTCTCCTGTTAGAACAAACTCTTCTTTTGATACACAAATGAATCCACTAGTTATGGTGGATGAGGGAGAGAAAACCATAATTGGTATAGAAAAGAGTCTTCAATTGAGGAAAATATATGACATTGATCTTCAAACTATACTTGATTGGCCTGAACGTCCATTAAACGAAACTCGTAATTTTGATTCGACTCCGAAGTTGCGTAGAGTACTAAGCAGTTCAGCTAAAACTGGATTTAGTTTGATAGATAGTTCTTCAATGTATGGTTATGGAAAGAAAAGTTCATACCGAAGTTCTGGAAATTTGAGTTTGCTATGGAGAGAAAAACAACAAGAAACGGTTCCTCGAGTAGTTGATGTATCTGATATGTCATCTGACGAAGAAAATGATAGTTTCAATGAATTACAAGATGATAAAGATGTTAGCGAGAAATCACATCGGAAGTATGTTAGGATTGCGAGTAAGCAGATGGTAGGAATATATGTGTCTGTTTGGGTGCAAAGGAAGCTGAGAAGGCACATTCATCATTTGAAAGTTTCTCCTGTTGGAGTTGGTCTTATGGGCTACATGGGAAACAAGGGGTCTGTTTCGGTTAGTATGTCGGTTTTTCAGTCGCGTATGTGCTTTGTCTGTTCCCATCTTGCTTCTGGCCAAAAAGATGGAGCGGAGCAAAGACGAAACTCAGATGTTCATGAAATTCTACAGCGCACTCGATTCTCTTCAGTCTTTGACACAGATCAACCGCGCACGATTCCATCACACGATCAGATTTTTTGGTTTGGAGATTTGAATTACCGTATCAATATGTCGGATGGCGAGGTTCGGAAGCTAGTAGCTCTAAAAAAGTGGGATGAACTCAAGAATTATGACCAGCTAAGAATTGAATTATGTAATGGTCATGTATTTGAGGGATGGAAAGAAGGGTTGGTAAATTTTCCACCAACTTACAAGTATGAATTTAACTCCGATAAATATGCGGGCGAGGTCACACAAGAAGGCGAAAAAAAGAGATCTCCAGCATGGTGTGATCGCATATTGTGGATAGGAAAAGGAATAAAGCAACTCGAGTATCAATGTGCAGAAAATAAGCTCTCGGATCATCGACCAGTTAGCTCAATCTTCTTGGTTGATGTCGAAGTAATTGATCGCCGGAAACTACATCGAGCTCTAAATTTCACTAGTGCAGTTGTACATCCAGAGATTTTCCTTAGAGAGGATGATGGAGACATGTTCTAG 1716 0.3928 MKTRKGKRSEVFWPSIVMKKWLNIKQKVCDFSEDEADTETESEDDNDTCCKDYKARRHRRGKSETLRAQYIDSKEVRVTIGTWNVAGVSPCNDLEIDGWLCTQKPADIYIIGFQEVVPLNAGNVLGAEDNKPILKWEEIIRRTLNKSPESVTKQKSYSAPPSPVRTNSSFDTQMNPLVMVDEGEKTIIGIEKSLQLRKIYDIDLQTILDWPERPLNETRNFDSTPKLRRVLSSSAKTGFSLIDSSSMYGYGKKSSYRSSGNLSLLWREKQQETVPRVVDVSDMSSDEENDSFNELQDDKDVSEKSHRKYVRIASKQMVGIYVSVWVQRKLRRHIHHLKVSPVGVGLMGYMGNKGSVSVSMSVFQSRMCFVCSHLASGQKDGAEQRRNSDVHEILQRTRFSSVFDTDQPRTIPSHDQIFWFGDLNYRINMSDGEVRKLVALKKWDELKNYDQLRIELCNGHVFEGWKEGLVNFPPTYKYEFNSDKYAGEVTQEGEKKRSPAWCDRILWIGKGIKQLEYQCAENKLSDHRPVSSIFLVDVEVIDRRKLHRALNFTSAVVHPEIFLREDDGDMF* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1832 571 SMART i5p_5 251 542 IPR000300 GO:0016791|GO:0046856
Psa4g1832 571 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 54 564 IPR045849 GO:0004445|GO:0046855
Psa4g1832 571 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 54 IPR045849 GO:0004445|GO:0046855
Psa4g1832 571 MobiDBLite consensus disorder prediction 276 300 - -
Psa4g1832 571 Gene3D Endonuclease/exonuclease/phosphatase 56 162 IPR036691 -
Psa4g1832 571 Gene3D Endonuclease/exonuclease/phosphatase 255 560 IPR036691 -
Psa4g1832 571 MobiDBLite consensus disorder prediction 150 169 - -
Psa4g1832 571 SUPERFAMILY DNase I-like 67 555 IPR036691 -
Psa4g1832 571 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 54 - -
Psa4g1832 571 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 54 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1832 Psa-Chr4 130488630 130493303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1832 290 543 Acyl Lipid Metabolism Gene Families AT2G43900 31.419 1.34e-37 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1832 K24221 - mtr:MTR_4g098850 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3954 2 412804680 412807493 Psa4g1832 4 130488630 130493303 PCT