Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3954 ATGAAGGGAAGAAGAGGAAAAAGATCAGAGGCTTTTTGGCCTTCTATTGTGATGAAAAAATGGCTTAATATTAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTTGATACTGAAACTGAGAGTGAAGATGATGTTTTCTCTCCTAAACAATCGAAAATGGAAGTTCGATGCGGCGAAGATAATCCATTTAGAACACAAGGGGTTCAGTCTATATTCTCAAGTCAAATACCAGATGCATCTTTTAAGAAAGCATACAAAACAAAACACAGAAGAGGAAAATCGGAAACTCTGCGTGCTCAGTATATAAACACTAAGGAAGTGAGGGTAGCAATTGGATCTTGGAATGTTGCTGGAAGACATCCGTCCGAGGATCTTGATATCGACGACTGGATTTGTGCCGAAGAGCCGAGTGATATTTACATTTTCGGTTTTCAGGAAGTTGTTCCACTGAATGCTGGAAATGTACTTGGAGCTGAGGATAATACGCCGATCCAGAAATGGGAAGCGATCATTAGAAGATCTCTGAACAAGTCTTCTGAGCCTGACAGCAAACATAAAAGCCATAGCGCGCCTCCTTCTCCGGTTTTGAGAACTTCTTCTGCTGCGGATGTTCTGGCCGAAAATATGGATACTGATAATCCAATTGACATGATGAATGATGAGTACATGGAAAATGTTGTAGAGAAATATGATCTGCAACAACAGTTGGAAGCGAATAATGTAATTAGTATCGGAAATGATATACATGTGAGGAAAGTTTATGGTATTGATCTTGATTGGCCTGAACGTCCGTTAGACGCGATCTCACAAATTGTTGATTCGAATCCGAAGTTGCGGAGAGTACTAAGTAGTTCAGCTAGAATTGGGTTTGACTTGAATGAGAATGCTTTCATATACAGCGGTGGTGGTGGTGGTGGTGGTGGATTGAGACGCTCGCACCATAGTTCGGGAAATTTGGGCTTGTTATTGAAAGAGCAACAGGTTATACCGAAAGTAGTTGATTCGTTAGATGATGTATCTGAGATGTTGTCTAATGAGGACGATGATGCTTTTATTGAACTACCTGAGAACCAAGATGATGATGCATTATGCGCGACGAAATCGCATGCGAGGTATGTTCGGATTATCAGCAAGCAAATGGTGGGAATATATGTATCTGTTTGGGTGCAGAGGAGGTTGAGAAGACACATTAATAATTTGAAAGTTTCTCCTGTTGGAGTTGGTCTTATGGGCTACATGGGAAACAAGGGTTCTGTTTCAATCAGCATGTCACTCTTTCAGTCGCGTATGTGTTTCGTTTGTTCTCATCTGACTTCTGGCACGAAAGATGGAGCCGAACAAAGACGAAACTCTGACGTTAATGAAATTCTACGTCGCACATGTTTCTCGTCCGTCTTCGATACAGATCAAGCACTAACAATACCATCGCACGATCAGATTTTCTGGTTTGGAGATTTGAATTATCGGATCAGCATGTTAGACTCCGAAGTTCGAAAATTGGTGGCTCTAAAAAAATGGGATGAACTAATGTATTATGATCAGCTAAGCAACGAACTGCGTGTTGGACGCGTATTTGAAGGATGGAAAGAAGGGTTGATAAACTTTGCACCTACTTACAAATACGAAATCAACTCTGATAGATATGTTGGTGAGATTCCGAAGGAAGGCGAGAAAAAACGAGCTCCTGCATGGTGTGACCGTATACTATGGCTAGGAAAAGGAATAAAGCAACTACAATACGAACGTGCGGAAATTAAGCTCTCGGATCATAGACCGGTTAGTTCAATTTTCTCGGTTGAAGTCGAAGTATTCGATCATCGCAAACTAAGAAGAGCGCTAAATTTTACTAGTACTGCTGCTGTTCATCCTGAGATTTTCCCTGATGAAGAAGATGGTCAATTTTACTAG 1911 0.4092 MKGRRGKRSEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDVFSPKQSKMEVRCGEDNPFRTQGVQSIFSSQIPDASFKKAYKTKHRRGKSETLRAQYINTKEVRVAIGSWNVAGRHPSEDLDIDDWICAEEPSDIYIFGFQEVVPLNAGNVLGAEDNTPIQKWEAIIRRSLNKSSEPDSKHKSHSAPPSPVLRTSSAADVLAENMDTDNPIDMMNDEYMENVVEKYDLQQQLEANNVISIGNDIHVRKVYGIDLDWPERPLDAISQIVDSNPKLRRVLSSSARIGFDLNENAFIYSGGGGGGGGLRRSHHSSGNLGLLLKEQQVIPKVVDSLDDVSEMLSNEDDDAFIELPENQDDDALCATKSHARYVRIISKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRMCFVCSHLTSGTKDGAEQRRNSDVNEILRRTCFSSVFDTDQALTIPSHDQIFWFGDLNYRISMLDSEVRKLVALKKWDELMYYDQLSNELRVGRVFEGWKEGLINFAPTYKYEINSDRYVGEIPKEGEKKRAPAWCDRILWLGKGIKQLQYERAEIKLSDHRPVSSIFSVEVEVFDHRKLRRALNFTSTAAVHPEIFPDEEDGQFY* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3954 636 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 629 - -
Psa2g3954 636 SUPERFAMILY DNase I-like 99 616 IPR036691 -
Psa2g3954 636 MobiDBLite consensus disorder prediction 32 53 - -
Psa2g3954 636 Gene3D Endonuclease/exonuclease/phosphatase 87 192 IPR036691 -
Psa2g3954 636 SMART i5p_5 331 606 IPR000300 GO:0016791|GO:0046856
Psa2g3954 636 MobiDBLite consensus disorder prediction 177 199 - -
Psa2g3954 636 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 629 IPR045849 GO:0004445|GO:0046855
Psa2g3954 636 Gene3D Endonuclease/exonuclease/phosphatase 334 625 IPR036691 -
Psa2g3954 636 Pfam Endonuclease/Exonuclease/phosphatase family 336 591 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3954 Psa-Chr2 412804680 412807493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3954 373 571 Acyl Lipid Metabolism Gene Families AT1G05630 35.398 3.36e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3954 K24221 - ccaj:109800886 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3954 2 412804680 412807493 Psa4g1832 4 130488630 130493303 PCT