Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1678 ATGAGTTCCGGTGACCTCCTCAGCGTCGAACCTCTCGAACTCAAGTTCCCATTTGAGCTCAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCTAATAAGACTGATAGCTATGTAGCTTTCAAGGTGAAAACAACGAATCCGAAGAAGTATTGTGTTCGTCCGAACACTGGAATTGTCTTGCCGAGATCTACCTGCGATGTTATGGTTACCATGCAAGCGCAAAAAGAAGCTCCAGCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGTGTAAAAACCAACGATGGTGTTAGTGCGAAAGATATCTCTGCAGAAATGTTCAACAAGGAGGCAGGGCATGTGGTTGATGAGAGCAAATTGAGAGTGGTGTATGTGTCTCCGCCTCAACCACCATCTCCAGTCCCAGAAGGTTCCGAGGAAGGGTCCTCACCTAGAGGTTCTGTTTCAGAAAATGGAAATGCCAATGGTCCTGACTTCGCTCAAGTAACACGGGGATTTGCTGAACGACCTGAGGCTCAAGACAAATCTGCAGAGGCAAGAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATTCAACAAATTAGCAAGCTTCGCCAGGAACTGGAGCTGCTGAAACGTGAAGGCAACAAAAATCGTGGTGGAGTGTCATTTATCTTTGTCATATTAATTGGCTTACTTGGCATAATCATGGGGTATCTCATGAAGAAGACCTAA 726 0.4463 MSSGDLLSVEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVMVTMQAQKEAPADMQCKDKFLLQSVKTNDGVSAKDISAEMFNKEAGHVVDESKLRVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGPDFAQVTRGFAERPEAQDKSAEARALISRLTEEKNNAIQQISKLRQELELLKREGNKNRGGVSFIFVILIGLLGIIMGYLMKKT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1678 241 MobiDBLite consensus disorder prediction 128 156 - -
Psa4g1678 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Psa4g1678 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Psa4g1678 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Psa4g1678 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Psa4g1678 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Psa4g1678 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Psa4g1678 241 Coils Coil 177 211 - -
Psa4g1678 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1678 Psa-Chr4 118233910 118238098 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1678 - - gmx:100527687 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1678 4 118233910 118238098 Psa2g4008 2 415406033 415408359 PCT