Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4008 CTCATCACTATTACTCCCGACGAGCTCAGGTTTCAATTTGAGCTGGAAAAGCAAACATTTTGTGATCTTAAAGTCTCCAATAACACACAGGACTATGTTGCTTTCAAGGTCAAAACAACTTCCCCTAAGAAGTATTTTGTACGCCCAAACACAGGTGTTATACATCCCTGGGATTCATGTATCATCAGAGTCACTCTCCAAGCTCAACATGAATACCCTCCGGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAAAAGTGAGTCCAAATACTGATGTTGATGATCTTCCTCAAGATACGTTTACTAAGGATAGCGGTAATTCAATAGAGGACTTGAAACTAAGAGTCTCATATATCTCTCCCACCTCACCCGAAGGAGGATCTGAAGATGATGCGAAGAATTCCACACAAAAACTTGATTCATCTTCTAGTCAGGCTGTACAGGCCCTGAAGGAAGAAAGAGAGACCATTCTCAGACAAACGCGGCAGCTTCAACAGGAACTGGACATGCTGAAAAGGCGAAGAAACCAAAGAGGCGATCCTGGCTTTTCCTTCACATTCGCCCTTTTTGTTGGTCTCCTTGGATTTTTGCTTGGCTTTCTTTTGAAAATTTTATCCTCTTCACCATCTACAGAATAA 645 0.4171 LITITPDELRFQFELEKQTFCDLKVSNNTQDYVAFKVKTTSPKKYFVRPNTGVIHPWDSCIIRVTLQAQHEYPPDMQCKDKFLLQSTKVSPNTDVDDLPQDTFTKDSGNSIEDLKLRVSYISPTSPEGGSEDDAKNSTQKLDSSSSQAVQALKEERETILRQTRQLQQELDMLKRRRNQRGDPGFSFTFALFVGLLGFLLGFLLKILSSSPSTE* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4008 214 PIRSF VAMP_assoc_prot 125 206 IPR016763 GO:0005789
Psa2g4008 214 PIRSF VAMP_assoc_prot 1 159 IPR016763 GO:0005789
Psa2g4008 214 SUPERFAMILY PapD-like 1 128 IPR008962 -
Psa2g4008 214 Coils Coil 149 176 - -
Psa2g4008 214 MobiDBLite consensus disorder prediction 123 148 - -
Psa2g4008 214 Pfam MSP (Major sperm protein) domain 2 104 IPR000535 -
Psa2g4008 214 ProSiteProfiles Major sperm protein (MSP) domain profile. 1 121 IPR000535 -
Psa2g4008 214 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 1 211 - -
Psa2g4008 214 Gene3D Immunoglobulins 1 125 IPR013783 -
Psa2g4008 214 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 211 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4008 Psa-Chr2 415406033 415408359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4008 - - aprc:113869624 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1678 4 118233910 118238098 Psa2g4008 2 415406033 415408359 PCT