Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1381 ATGCTACTAGATAAAATGATAGATGCATCCAATAAGACAAACATTCAAGGAAGAATTATAAATGTTTCTTCAGCAGTTCATAGTTGGGCAAAAAGAACTTGTTTTTGTTTCAAAGACATGTTCAATGGAAAAAATTACAACGGGACGCGCGCATATGCCCAATCAAAATTAGCCATGATTCTACATGTAAAGGAAATGGCTAGACGGCTAAAGGTAAAGAATGCAAGAGTAACTATCAATGCAGTGCATCCAGGCATTGTGAAGACAGAAATTATTAGAGCACATAAGGGCTTAATAACAGATTTCTTGTTTTTCATTGCATCAAAGTTGCTCAAAACAATATCACAGGGTGCATCAACGACTTGTTATGTTGCTCTGAGCCAGAAAATAGAAGGGAATAAACATGATAATGAGGATCAAGCAGAGAATGAGGGATATGCTAATAATGTTGATGGGGATTATGATTCCTTTGCATTAGAATTTATAGATGCAGCCACTCTTGACGATGATAGTGATTCTAGTTATGAAGGGAACGATGTTAAAGTTGTGGATGATGAAAAATCTACTGAAGTTTTTCAGAAAGACATTAGAATTCTAAAGCGAACATGGATTGACATGGTGGGATTTGAGAATATATTAAGGGTGGATAAAAGTAAGATACTAACCTAA 669 0.3528 MLLDKMIDASNKTNIQGRIINVSSAVHSWAKRTCFCFKDMFNGKNYNGTRAYAQSKLAMILHVKEMARRLKVKNARVTINAVHPGIVKTEIIRAHKGLITDFLFFIASKLLKTISQGASTTCYVALSQKIEGNKHDNEDQAENEGYANNVDGDYDSFALEFIDAATLDDDSDSSYEGNDVKVVDDEKSTEVFQKDIRILKRTWIDMVGFENILRVDKSKILT* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1381 222 PRINTS Glucose/ribitol dehydrogenase family signature 11 27 IPR002347 -
Psa4g1381 222 PRINTS Glucose/ribitol dehydrogenase family signature 52 71 IPR002347 -
Psa4g1381 222 PRINTS Glucose/ribitol dehydrogenase family signature 75 92 IPR002347 -
Psa4g1381 222 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 1 133 - -
Psa4g1381 222 Gene3D - 1 192 - -
Psa4g1381 222 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 126 IPR036291 -
Psa4g1381 222 Pfam short chain dehydrogenase 44 92 IPR002347 -
Psa4g1381 222 PANTHER RETINOL DEHYDROGENASE 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1381 Psa-Chr4 95662354 95664066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1381 - K11153 gmx:100819058 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1381 4 95662354 95664066 Psa4g1381 4 95662354 95664066 ECH
Psa4g1381 4 95662354 95664066 Psa5g2696 5 204916168 204921450 PCT