Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0635 ATGGCTATCATAACAACTATCACCGGCAAACGCCCCTACCGGTGGCTCTCCGTTAATCACAGCGCTTCATCTCCCAGTTCTTCAGAGTTCAAAAGACAGAAAGTATCACCAACCATGTCCCACAATAAGCCATCACAATTACCCACCGCCACAACCAAGGCCAATGTTGTTTCCAGAATTTCTCGTTACCCTGAAACTAAGCCACCTTTGCGTAGAGAAGTTCACGCTCCCTGTAGCAGACCGCGCAAATTCGATTTATCAAACAATTTCAAACTAGCATCGTCGAACTCCGTGGTTAGTGGTATCGGTATCAGCAATGTGTTATTTGAAAATTATTCTGCATTGGCTACCATTCCTTTACAGGGAAAAGAAAAGGATGATCATAAGGAGGTTGTTTCAGAAGATTCAAAGGATGAAGATGTAGAAGAAGTGTGCGCTGTGCCGGTGGAGGTCGAGGCTGTGAATGGTGGCATACAGAAACAGTCAAGTTCGGTTTCTGAGTTGAGTAATGATAAATTGAATGTGGTTGATGATGCTGCAAAGATTTTGGATACTTTGTCTTTGGATCCGGAGAATGATGTTTCCAGTGAAGTGCCGCCGGAACCTTTTGTTCCTCTTACAAAAGAGGAAAAAGTTGAGGTTACACGAGCCTTTTCTGCCAATAGGAAGAAGATCTTGGTTGTTCATGAGAATTCCAATATTGAAATATCGGGCGAAAAGTTTCAGTGCCTTAGGCCAAGTGGATGGTTAAACGATGAGGTGATAAACTTGTACCTTGAGTTACTGAAAGAGAGGGAGAGAAGAGAGCCACAGAAGTTTCTGAACTGTCATTTTTTCAACACCTTTTTCTATAAGAAGTTAATAAGTGGCAAAAATGGTTATGATTACAAATCTGTGAAGAGATGGACTACTCAAAAGAAATTGGGCTATGGCCTACATGAATGTGATAAAATATTTGTACCTATTCACCAGAAGATCCATTGGTGCCTAGGTGTTATCAATAAGAAGGAAAAGAAGTTTCAGTATCTTGATTCACTGAAAGGAATTGATACCCAAGTACTGGAAGTGCTGGCAAGATATTTTGTAGATGAAGTAAAGGACAAGACTGGAGAAGATATTGACATAAGTTATTGGGAAAAAGAATTTGTTGAAGAGCTTCCTGAACAGAAGAATGGGTCTGATTGTGGGGTATTTATGGTCAAATATGCTGATTTTTATAGCAGAAACTTGAGGTTGTGTTTCAATCAGGAACATATGCCTTATTTCAGGCTTAGAACAGGTAAGGAAATTTTGAGATTGAGAGCTGAATAA 1311 0.402 MAIITTITGKRPYRWLSVNHSASSPSSSEFKRQKVSPTMSHNKPSQLPTATTKANVVSRISRYPETKPPLRREVHAPCSRPRKFDLSNNFKLASSNSVVSGIGISNVLFENYSALATIPLQGKEKDDHKEVVSEDSKDEDVEEVCAVPVEVEAVNGGIQKQSSSVSELSNDKLNVVDDAAKILDTLSLDPENDVSSEVPPEPFVPLTKEEKVEVTRAFSANRKKILVVHENSNIEISGEKFQCLRPSGWLNDEVINLYLELLKERERREPQKFLNCHFFNTFFYKKLISGKNGYDYKSVKRWTTQKKLGYGLHECDKIFVPIHQKIHWCLGVINKKEKKFQYLDSLKGIDTQVLEVLARYFVDEVKDKTGEDIDISYWEKEFVEELPEQKNGSDCGVFMVKYADFYSRNLRLCFNQEHMPYFRLRTGKEILRLRAE* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0635 436 ProSiteProfiles Ubiquitin-like protease family profile. 234 406 IPR003653 GO:0006508|GO:0008234
Psa4g0635 436 MobiDBLite consensus disorder prediction 24 52 - -
Psa4g0635 436 Pfam Ulp1 protease family, C-terminal catalytic domain 249 429 IPR003653 GO:0006508|GO:0008234
Psa4g0635 436 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 191 435 - -
Psa4g0635 436 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 42 168 - -
Psa4g0635 436 Gene3D Adenoviral Proteinase; Chain A 193 433 - -
Psa4g0635 436 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 42 168 - -
Psa4g0635 436 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 191 435 - -
Psa4g0635 436 SUPERFAMILY Cysteine proteinases 202 434 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0635 Psa-Chr4 39284112 39288204 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0635 K08592 - gmx:100797013 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0635 4 39284112 39288204 Psa4g0635 4 39284112 39288204 ECH
Psa4g0635 4 39284112 39288204 Psa1g3508 1 303078809 303084450 PCT