Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3508 ATGGGTGTGACGACTAGCAACCGCAAACGCTCAGAGGAATGCATGTCCGTCAATCACAATCACACTATCTCTCCTCCATCTTCAGATTACCGCAGAAAGAGACTCAAATTCTCGTCCGAATCGACGCTAATCGTTTCAACCTCATACGCCGCCGTTTCCAGGATTTCTCGTTATCCCGACGTCAAACCGCCGTTCCTTCGTGAAGTTCACGCGCCGTGCAGACCTAAAAAGTTCAACCTTGCCAGAAAGTTATCGAGCTTGGGCGACGATATCATGGGGAATTTTCTGGCGAGGAATTACGAAAAGGCGAAGCGTGCTGCATTGGGGGAATGCAGATTTGTGTCAACGTCGTTGCCGGATTCAGCTTTGACTAATGCTATTGTGAACTTGGAGGAGCATGATCTTTCCAGCGTTCATGTTTATAAGAAGTTGCTTGAGGGTGTTCAAAGAAGAACGGACACGATTCAGAGTCTGAATTTTCAAATTGAGTTGAATGAGAAGCGCCGGGAGACGTTTCAATTGTTGCGTCCTAAGAAGGAATTGGTTGAGGAAGTCCCGTTTGAGCCTTTTGTCCCTCTAACAGATGATGAAGAACACGAGGTTTCTCGTGCGTTTTCTACCAACAGGAAGAAAATACTGGTTGCTCATGAGAGTTCTAATATAGAGTTATCGGGAGAAAAGATTCGGTGCCTTCTCCCGGGTGCATGGTTAAATGATGAGGTGATAAATTTGTACCTTGAGTTGTTGAAAGAGAGGGAGCGGAGAGAACCAAAGAAGTTTCTGAAATGTCATTTTTTCAACACCTTTTTCTACAAAAAGTTAATAAGTGGCAGGGACGGATATGATTACAAATCTGTCAGAAGATGGACGACTCAAAGGAAATTGGGATACAACCTATTCGATTGTGATAAAATATTTGTACCCATCCATCAAGAAATCCACTGGTGCCTGGCGGTTATCAATAAAAAAGATGCAAAATTCCAGTATCTTGACTCGTTGAAAGGAAAGGATAACCGTGTGCTAAAAGTGCTGGCTAGATACTTCGTAGATGAAGTAAAGGACAAAACTGGGAAAGATATTGATGTAAGCACGTGGGAGAAAGAATTTGTGGATGACCTTCCTGAGCAGGAAAATGGGTATGATTGCGGTGTGTTTATGATCAAATATGCCGACTTTTATAGCAGAGGCTTGGGGCTATGTTTTAATCAGGAGCACATGTCTTACTTTCGGCGTAGGACAGCTAAAGAGGTATTGAGATTGAGAGCTAACTAA 1272 0.434 MGVTTSNRKRSEECMSVNHNHTISPPSSDYRRKRLKFSSESTLIVSTSYAAVSRISRYPDVKPPFLREVHAPCRPKKFNLARKLSSLGDDIMGNFLARNYEKAKRAALGECRFVSTSLPDSALTNAIVNLEEHDLSSVHVYKKLLEGVQRRTDTIQSLNFQIELNEKRRETFQLLRPKKELVEEVPFEPFVPLTDDEEHEVSRAFSTNRKKILVAHESSNIELSGEKIRCLLPGAWLNDEVINLYLELLKERERREPKKFLKCHFFNTFFYKKLISGRDGYDYKSVRRWTTQRKLGYNLFDCDKIFVPIHQEIHWCLAVINKKDAKFQYLDSLKGKDNRVLKVLARYFVDEVKDKTGKDIDVSTWEKEFVDDLPEQENGYDCGVFMIKYADFYSRGLGLCFNQEHMSYFRRRTAKEVLRLRAN* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3508 423 MobiDBLite consensus disorder prediction 1 25 - -
Psa1g3508 423 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 135 422 - -
Psa1g3508 423 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 109 - -
Psa1g3508 423 Pfam Ulp1 protease family, C-terminal catalytic domain 236 416 IPR003653 GO:0006508|GO:0008234
Psa1g3508 423 ProSiteProfiles Ubiquitin-like protease family profile. 221 393 IPR003653 GO:0006508|GO:0008234
Psa1g3508 423 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 109 - -
Psa1g3508 423 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 135 422 - -
Psa1g3508 423 SUPERFAMILY Cysteine proteinases 189 422 IPR038765 -
Psa1g3508 423 MobiDBLite consensus disorder prediction 1 28 - -
Psa1g3508 423 Gene3D Adenoviral Proteinase; Chain A 190 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3508 Psa-Chr1 303078809 303084450 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3508 K08592 - gmx:100802161 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3508 1 303078809 303084450 Psa1g3508 1 303078809 303084450 ECH
Psa4g0635 4 39284112 39288204 Psa1g3508 1 303078809 303084450 PCT