Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0492 ATGGAAGAAGTTAACGTTGTTGAAACTAAGGATGGAACCGTTTCGGTAGCTACTGCGTTTGCTGGTCACCAGGAAGCTGTGCAGGCTAGAGACCACAAATTTTTAAGAAAAGCAGTTGAAGAAGCATATAAAGGGGTAGATTGTGGAGATGGAGGCCCTTTTGGTGCTGTTATTGTTCACAACGATGAAGTAGTTGCTAGTTGTCACAACATGGTTCTGAATTACACCGATCCAACTGCTCATGCAGAGGTCACAGCAATCAGAGAGGCTTGTAAGAAGCTTAAGCAGATAGAACTTTCAGATTGTGAAATATATGCTTCTTGTGAACCCTGCCCCATGTGCTTTGGTGCAATCCACCTCTCGCGGATTAAGAGATTGGTTTATGGAGCAAAGGCAGAGGCAGCAATCGCTATTGGGTTTGACGATTTTATTGCAGATGCATTGCGAGGTACTGGATTCTACCAGAAAGCAACGTTGGAAATTAAAAGAGCTGATGGTAATGAGGCCATGATTGCAGAAGAGGTTTTTGAGAAAACAAAGATATAA 546 0.4286 MEEVNVVETKDGTVSVATAFAGHQEAVQARDHKFLRKAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNYTDPTAHAEVTAIREACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKATLEIKRADGNEAMIAEEVFEKTKI* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0492 181 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 81 118 IPR016192 GO:0008270|GO:0016787
Psa4g0492 181 SUPERFAMILY Cytidine deaminase-like 25 144 IPR016193 GO:0003824
Psa4g0492 181 Gene3D Cytidine Deaminase, domain 2 29 180 - -
Psa4g0492 181 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 180 - -
Psa4g0492 181 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1 180 - -
Psa4g0492 181 CDD nucleoside_deaminase 35 142 - -
Psa4g0492 181 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 31 129 IPR002125 -
Psa4g0492 181 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 143 IPR002125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0492 Psa-Chr4 29964979 29970002 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0492 - - cam:101506670 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0492 4 29964979 29970002 Psa1g0395 1 24673370 24675258 PCT