Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0395 ATGGTGCAAACTAAGGATGGAACTGTTGCTCTAGCTTCTGCTTTTTCTGGCCAGAAGCAAGCTATAAAGGATAGAGACCACAAATTTTTAAGAAAAGCAGTTGAAGAAGCATATAAAGGTGTAGATTGTGAAGATGGAGGACCTTTTGGTGCTGTTATTGTTTTTAATGATGAAGTTGTTGCTAGCTCTCACAATATGGTTCTCAGAAACAATGACCCTACTGCTCATGCTGAAGTCACAGCAATAAGAGAGGCATGTAAGAAACTGAAGCAGATAGAACTCTCAGATTGTGAAATATATGCTTCTTGTGAGCCATGCCCAATGTGCTTTGGTGCTATTCACCTTTCACGTGTTAAGAGGTTGGTTTATGGAGCAAAAGCAGAGGCAGCAATTGCGATTGGTTTTGATGATTTTATAGCTGATGCCTTGCGAGGTACTGGCGTTTATCAAAAAGCACATTTGGAAATTAAAAGAGCTGATGGCAAAGAGGCCATTTTTGCTGAAGAAGTGTTTGAGAAAACTAAGGAAAAGTTTCGATTGTATTAA 546 0.3919 MVQTKDGTVALASAFSGQKQAIKDRDHKFLRKAVEEAYKGVDCEDGGPFGAVIVFNDEVVASSHNMVLRNNDPTAHAEVTAIREACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGFDDFIADALRGTGVYQKAHLEIKRADGKEAIFAEEVFEKTKEKFRLY* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0395 181 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 25 124 IPR002125 -
Psa1g0395 181 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 24 138 IPR002125 -
Psa1g0395 181 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 2 180 - -
Psa1g0395 181 CDD nucleoside_deaminase 30 137 - -
Psa1g0395 181 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 76 113 IPR016192 GO:0008270|GO:0016787
Psa1g0395 181 Gene3D Cytidine Deaminase, domain 2 17 179 - -
Psa1g0395 181 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 2 180 - -
Psa1g0395 181 SUPERFAMILY Cytidine deaminase-like 22 139 IPR016193 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0395 Psa-Chr1 24673370 24675258 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0395 - - gmx:100500436 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0492 4 29964979 29970002 Psa1g0395 1 24673370 24675258 PCT