Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0415 ATGGACCAAGAACAAGAACATGAACAACCATCTTCTTCTTCTTCTGCTTTTCGCAAGAGAATACTTGAACATGATGATGATACTGATGCGTATCATCTCGGTCTTTTGCCTCCAGAAGCTTATGATACTTCCAAACGCATCAAAACGTACGATTTCTTAGCCACTTTCGACCAACCAAAGCGCGAAACCATTGTTATCTCTAACAGTGATGGTGAAGAAGTTCAAGATGACAGTGAAAGTGATGATGATGAGAGAAGCAATGCCGCGCGGACTCTCGCATTATTTCCTAGAAACCAGCAAGAGGAGCGTCACAAGAATATCGCAAGGAGATATGCAGCACGCATTCACAATGCTTCTGAGAATAAAAACAACGATGTTGTGATTGTGAGCAGTGCGGATGATAAAATCAATGATGCTGATGTGGAAGATGAAGTTGATGATGATTCTCCAACTCCATTCTCTGAAGCAATCAAAGCTATTCAAGAACGCGCCGAGAGAAACCAGAAAAGAGGGATTGTTGAAGAACCTCCTGTATGGATTTCAAAAAGGAATGAAAAGGATTCAGTTAGAAGAAGGTCGTGTGTTCCGTCATTGCAAGAACTTTCTCTTAACATTCTTGCTCAGCATTCTGATGCAGTTGTTTCGCTCGACTGTGTCAACGACGACTTCAGACAAAGGCTTAGTAATCTGCTGTGTGATTCAAGAAAAATGAACTGTTACTTTCTTGAACTACTTCTTATTGGTGTTCCGACTCAAATTCGGCTTAAAGACTGTTCCTGGTTGACAGAAGAAGAATTTACTAATTATTTTCAAACACTCGACACTTCCGAATTAGAGGTGCTACAACTTGACAAATGTGGAAGAATTGTGACTGAACATACATTGCCTGCTACATTGGCAAAGTCACCAAACTCCTTGTCTAAATTAACCATTCTATCGCTCACTGGTGCATGTCGTCTTACGAATGAAGGATTGCGGTTACTAATTTCGTCAGCAACAGAACTTAGATCCATAAACCTAAGCCAATGTTCCCTTCTCACTTGGGATAGTCTTGACATTTTGGCTGATTCATTTGGATCAGTTTTGAAAGAGTTGCGTATTGATGATTGCATACTCATTGATGTTGCGTGTATTTTACCAGCCTTGAAGCGATTCAAACAATTACAAGTGTTGTCACTAGCTGGTGTTCCAACTGTTTCTGATAAATTTATCAAGAGTTATTTCATCGCGTGTGGTTACAATATTAAGGATCTTGTTTTAAAGGACTGCGTAAATTTGACAGATGCGTCGATGAGAGTCATTTCTAAACATTGTCCTGGTTTGCGCGTGCTTGATATTATGAACTTGGGAAAATTGACAGATTTATCTATTGGTTATCTTGCGAATAGTTGTCGCGGATTGCGTACATTGAAGCTATGCCGCAATCCATTCAGCGATGAAGCAATTTCGGTATTTTTGGAGTTAGCTGGCAAAACCTTGGAAGAACTTTCACTTAATAGCATTAAAAAGGTTGGCCTATTGACAGCCTCATCACTTGCAAAGAATGGCCAAAATTTGCATACCTTGGATCTATCATGGTGTCGAAATCTGTCTGACAACGAGCTCGGTTTAATTGTCGATAGCTGCTTGTCACTGAGGTCACTTAAGCTTTTCGGATGCTCGCAGTTAACAGATATGTTTTTCAAAGGACACTCAAACATAGGGACTCGGATCATTGGGCTAAAGTTGAGTCTTTTATTTCAGCAATTTGAATCGATCACGCTGTGA 1767 0.4018 MDQEQEHEQPSSSSSAFRKRILEHDDDTDAYHLGLLPPEAYDTSKRIKTYDFLATFDQPKRETIVISNSDGEEVQDDSESDDDERSNAARTLALFPRNQQEERHKNIARRYAARIHNASENKNNDVVIVSSADDKINDADVEDEVDDDSPTPFSEAIKAIQERAERNQKRGIVEEPPVWISKRNEKDSVRRRSCVPSLQELSLNILAQHSDAVVSLDCVNDDFRQRLSNLLCDSRKMNCYFLELLLIGVPTQIRLKDCSWLTEEEFTNYFQTLDTSELEVLQLDKCGRIVTEHTLPATLAKSPNSLSKLTILSLTGACRLTNEGLRLLISSATELRSINLSQCSLLTWDSLDILADSFGSVLKELRIDDCILIDVACILPALKRFKQLQVLSLAGVPTVSDKFIKSYFIACGYNIKDLVLKDCVNLTDASMRVISKHCPGLRVLDIMNLGKLTDLSIGYLANSCRGLRTLKLCRNPFSDEAISVFLELAGKTLEELSLNSIKKVGLLTASSLAKNGQNLHTLDLSWCRNLSDNELGLIVDSCLSLRSLKLFGCSQLTDMFFKGHSNIGTRIIGLKLSLLFQQFESITL* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0415 588 Gene3D Ribonuclease Inhibitor 203 406 IPR032675 -
Psa4g0415 588 Gene3D Ribonuclease Inhibitor 509 587 IPR032675 -
Psa4g0415 588 Gene3D Ribonuclease Inhibitor 407 508 IPR032675 -
Psa4g0415 588 MobiDBLite consensus disorder prediction 61 86 - -
Psa4g0415 588 PANTHER UNCHARACTERIZED 69 584 - -
Psa4g0415 588 SMART LRR_CC_2 306 331 IPR006553 -
Psa4g0415 588 SMART LRR_CC_2 516 541 IPR006553 -
Psa4g0415 588 SMART LRR_CC_2 412 437 IPR006553 -
Psa4g0415 588 SMART LRR_CC_2 332 357 IPR006553 -
Psa4g0415 588 SMART LRR_CC_2 438 463 IPR006553 -
Psa4g0415 588 SMART LRR_CC_2 464 488 IPR006553 -
Psa4g0415 588 SMART LRR_CC_2 542 575 IPR006553 -
Psa4g0415 588 MobiDBLite consensus disorder prediction 1 23 - -
Psa4g0415 588 PANTHER F-BOX/LRR PROTEIN 69 584 - -
Psa4g0415 588 SUPERFAMILY RNI-like 253 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0415 Psa-Chr4 25640424 25643048 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0415 K15082 - gmx:100798274 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0415 4 25640424 25643048 Psa1g3032 1 264605069 264609698 PCT