Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3032 ATGGTTCCACCAACCAAAACAACCCCCAAACCCTCCAAACCAAACCGCATTCACCCTCTCACCCCCACTCAAACCACCGAATCTCCTCCCATTTTCTCCTCCGCCCCGCCGCGAAGACGCAGCCTCCGCCTCGCCTCCATTTCCATCTCCGAACCTCCCCAATCCCCAGCCGAATTAACCCCCAAACCCACCGCTAGGGTTTCCAAATCAAAAATCCAAAAACCGACCCCAACCGCTTCGGAATCCAAACCTAATCAACCAGTTGAAAGTTCCGTTAACTTGCGATCAGGAAAAAAAGTTGTTAAACGTGGAATCACTATCGCAAACGGAGATGAAGTTGGTTCTGAAAACAACGCTACAAAAAAGAACAAAATGAACGATGAAGGGGAATCGAGTAAAAGAAGAGGAGAGAAAGGGAAGGAAACCGTTGTTGTTGATGAAAATGAAAACAATGAAGTATCCGAAATCGAGAACACTACTACTGAAGAGAAAAATGATGCATCGAATGTTATAGAACAACCTAGAAATTCTAACAACAGGGAAGAACGTGGTTTGAGGAGGAACATGGATCGATTCCGGAACATAGCGAGAGAGAACGCTTTTCGTTTTGCTCATTTTGTGAATGACGAAAGCGATGCTGATGATTTATCTCCGGAAAATGAACTGGAGAAGAATGAGATTGAAGATTGGCCTGGTCCTTTTTCGACGGCTATGAAAATCATTAGGGATAGGGAGAAGAAAGGGATTCATTTTCAAGCTGGCTCTGATTCTATACAGAAGAGTTTGATTGATTCAATAAAGTGGAATCCGAAAACAAATGTGGAGAAGTTACATGGGACATTTTCTGCTCCGTCGTTGCAGGAACTTTGCATTCGGATTCTTGCTAAGAATGTTGATGCGGTTGTTTCGCTTGAGAGTGTGCCTGATGATTTGAGGCATAGGCTTAGTCAGTTGCTGTGTGATTCACGGAGAATTAATTACCACTTTTTTGAACTTCTTGTTGGTGGAACTCCAACGGAGATTCGGCTTAGAAATTGCTCGTGGTTGTCGGAGGAACATTTTACCAAGTGCTTTCAAGCTAGTGACACTTCTAATTTGGTGGTACTGCAACTTGATCTGTGTGGGCGATGTTTGCCGGATTATGTGGTAGTTGTTACTTTAGCACGGTCCCCAAAGCAGCTGCCTAAATTAACTAGTCTATCTCTCAGAGGTGCATGCCGACTCTCAGATGGGGGATTGCGTGCACTTGTTTCTTCTACTCCAACACTTAGATCAATAAATCTTAGCATGTGCTCCCTTCTCACTTCTGCTAGTCTTTATATTTTGGCTGAATCATTAAAATCTCTTTTGAAAGAGTTGTACCTTGATCATTGCCATGGCATTGATGCTGCACTAATTGTGCCAGCACTAGTGGAGCTTGAACATTTAGAAGTGTTGTCAGTGGCTGGCATTCCAACTGTTAGCGATACATTTGTCAAGGATTACATTGTTGCACGTGGTCACGACATGAAAGAGCTAATTCTGAAGGATTGCATAAACTTGACTGATGCATCAATAAAAGTCATTGCTGAACACTGTCCGGGAATATGTGGACTTGATTTATCAAATGTGTGCAAATTAACAGATATGTCCATGGGATATCTTACAAATGGCTGTCATGTACTTCATTCACTGAAGCTTTGCCGTAACTCATTCAGTGACGAAGCAATTGCTGCATTTGTGGAGACTAATGGAGAGTCTTTGAAAGAACTATCACTTAATAATGTTAAAAAGGTTGGCTACCACACAACCTTATCACTTGCAAGCCATGCAAAAAAACTGCATAGTCTAGATGTATCTTGGTGCCGAAATTTGACTGACAACACATTAGGTTTGATAGTGGACAGTTGCTTATCACTGAGATTACTTAAACTTTTTGGATGTACTCAGGTAACAGATGTTTTTCTGAAGGGCCACTCAAACTCTCAGGTCCAGATAATTGGTATAAAAATGACTTCTGTTTTACAACATGTCAAAGTGCCTGATCCTCATCAAGGCGCGTTGAATTTTTCATCTGTCTCCGTAGACTTGGCTGCATAG 2079 0.4228 MVPPTKTTPKPSKPNRIHPLTPTQTTESPPIFSSAPPRRRSLRLASISISEPPQSPAELTPKPTARVSKSKIQKPTPTASESKPNQPVESSVNLRSGKKVVKRGITIANGDEVGSENNATKKNKMNDEGESSKRRGEKGKETVVVDENENNEVSEIENTTTEEKNDASNVIEQPRNSNNREERGLRRNMDRFRNIARENAFRFAHFVNDESDADDLSPENELEKNEIEDWPGPFSTAMKIIRDREKKGIHFQAGSDSIQKSLIDSIKWNPKTNVEKLHGTFSAPSLQELCIRILAKNVDAVVSLESVPDDLRHRLSQLLCDSRRINYHFFELLVGGTPTEIRLRNCSWLSEEHFTKCFQASDTSNLVVLQLDLCGRCLPDYVVVVTLARSPKQLPKLTSLSLRGACRLSDGGLRALVSSTPTLRSINLSMCSLLTSASLYILAESLKSLLKELYLDHCHGIDAALIVPALVELEHLEVLSVAGIPTVSDTFVKDYIVARGHDMKELILKDCINLTDASIKVIAEHCPGICGLDLSNVCKLTDMSMGYLTNGCHVLHSLKLCRNSFSDEAIAAFVETNGESLKELSLNNVKKVGYHTTLSLASHAKKLHSLDVSWCRNLTDNTLGLIVDSCLSLRLLKLFGCTQVTDVFLKGHSNSQVQIIGIKMTSVLQHVKVPDPHQGALNFSSVSVDLAA* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3032 692 MobiDBLite consensus disorder prediction 117 147 - -
Psa1g3032 692 PANTHER F-BOX/LRR PROTEIN 147 685 - -
Psa1g3032 692 MobiDBLite consensus disorder prediction 1 185 - -
Psa1g3032 692 Gene3D Ribonuclease Inhibitor 376 494 IPR032675 -
Psa1g3032 692 MobiDBLite consensus disorder prediction 66 93 - -
Psa1g3032 692 SUPERFAMILY RNI-like 338 646 - -
Psa1g3032 692 PANTHER UNCHARACTERIZED 147 685 - -
Psa1g3032 692 MobiDBLite consensus disorder prediction 11 32 - -
Psa1g3032 692 Gene3D Ribonuclease Inhibitor 495 597 IPR032675 -
Psa1g3032 692 Gene3D Ribonuclease Inhibitor 598 675 IPR032675 -
Psa1g3032 692 SMART LRR_CC_2 526 551 IPR006553 -
Psa1g3032 692 SMART LRR_CC_2 394 419 IPR006553 -
Psa1g3032 692 SMART LRR_CC_2 630 663 IPR006553 -
Psa1g3032 692 SMART LRR_CC_2 604 629 IPR006553 -
Psa1g3032 692 SMART LRR_CC_2 552 576 IPR006553 -
Psa1g3032 692 SMART LRR_CC_2 500 525 IPR006553 -
Psa1g3032 692 SMART LRR_CC_2 420 445 IPR006553 -
Psa1g3032 692 SMART LRR_CC_2 578 603 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3032 Psa-Chr1 264605069 264609698 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3032 K15082 - gmx:100808150 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3032 1 264605069 264609698 Psa1g3032 1 264605069 264609698 ECH
Psa4g0415 4 25640424 25643048 Psa1g3032 1 264605069 264609698 PCT