Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0404 ATGAAGTCAATAATCGAGCATGTAGTTTTGTTCAAGATCAAAGAAGAAGCTTCACAATCCGAGATTCATTCCTTCGTAGAACAAGTCAATTCTCTCGTCTCTCTCGAACAACCACTTCACCTCACTATGGGTCCATTAACCACCATCCAATCCTCTTCCCTTTCATCTTTCAACTTCACTCACATACTCCATATCCGGTTCAGCTCCAAGGAAGATCTCCACGCCTATGCGGTTCACCCAACCCACGTATCAGTCGTCAACGATAACAAGTCTTTGGTGGTTGATAAGATGGCTCTTGATTGGGTCACGGAGGTTCACGGCGACGATTTGGTTTTACCGGTGGAGTCTGCTTTGCGGGTTGTGTTCTTCAAGCTGAAGGAGGGTCTGGGGGAAGATGTTAAAGAGGAGGTTTTGAAGGGTGTAAATGGAATTCAACGTGGAAAAGTTGTGCAGTTTACGTGCGGTGAGAATTTCTCTGCTGGTAGATCTAAAGGGTTTTCGATTGGTTCACTTGCGGTTTTTCCGGGGTTAAGCGAATTGAAGGAAGTTGATTCTGATGAGGAGTTTCGGAAATATGAGAAGATTAAGGAGAATCTGGATACTGTCTTGCTTCTTGATTATGTGGGACATGGCCAAACAGCGTCTTAA 648 0.446 MKSIIEHVVLFKIKEEASQSEIHSFVEQVNSLVSLEQPLHLTMGPLTTIQSSSLSSFNFTHILHIRFSSKEDLHAYAVHPTHVSVVNDNKSLVVDKMALDWVTEVHGDDLVLPVESALRVVFFKLKEGLGEDVKEEVLKGVNGIQRGKVVQFTCGENFSAGRSKGFSIGSLAVFPGLSELKEVDSDEEFRKYEKIKENLDTVLLLDYVGHGQTAS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0404 215 ProSiteProfiles Stress-response A/B barrel domain profile. 5 101 IPR013097 -
Psa4g0404 215 PANTHER STRESS RESPONSIVE A/B BARREL DOMAIN PROTEIN 3 210 - -
Psa4g0404 215 Gene3D - 1 103 - -
Psa4g0404 215 SMART Dabb_2 5 103 IPR013097 -
Psa4g0404 215 SMART Dabb_2 117 209 IPR013097 -
Psa4g0404 215 PANTHER - 3 210 IPR044662 -
Psa4g0404 215 Pfam Stress responsive A/B Barrel Domain 5 102 IPR013097 -
Psa4g0404 215 Pfam Stress responsive A/B Barrel Domain 119 207 IPR013097 -
Psa4g0404 215 ProSiteProfiles Stress-response A/B barrel domain profile. 117 207 IPR013097 -
Psa4g0404 215 SUPERFAMILY Dimeric alpha+beta barrel 3 107 IPR011008 -
Psa4g0404 215 Gene3D - 115 209 - -
Psa4g0404 215 SUPERFAMILY Dimeric alpha+beta barrel 118 208 IPR011008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0404 Psa-Chr4 24970807 24972326 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0404 - - lja:Lj3g3v2995900.1 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0404 4 24970807 24972326 Psa4g0404 4 24970807 24972326 ECH
Psa4g0404 4 24970807 24972326 Psa1g3012 1 264111951 264113576 PCT