Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0358 ATGGCGAAAACCCACACTTTTTTCATCTATTCCATTCTCCTACACATAACCATAACCAAAACCGAGCAATGCAAAATTCTGCTACCACAACAGTTTGATAATACTATATCCAACAAATTCCATAATGACCCTGCAACAATCCAACATGCTTCCAATGACTATGGCAACATGGTTCATGAATTTCCAGTAGCAGTGTTTCATCCATCTTCAATACAAGACATAATAACCCTAATAAAAATCTCATACAATAGCACCGTTCCTTTCAGCATAGCAGCTAGAGGACAAGGTCACTCCACAAATGGACAAGCCATGGCAGGTGATGGAGTTGTAGTTGACATGGCTAGCTTCAGAAAAGAAAGAAAAGAGGTAGCAATTAGTGTCTCTGAAGATCCTATGATTGGTTACTATGTTGATGTTGGAGGAGAACAAGTATGGATTGATGTTTTGTATGAGACACTCCTACATGGAGTTGCACCTGTTTCATGGACTGATTATCTTTACCTAACGGTGGGAGGAACACTTTCTAATGCTGGAATTAGTGGCCAGACATTTCGTTATGGACCTCAAATTACCAACGTTCATGAATTGGATGTCATTACTGGAAAAAGGAGATTTTCGTAA 621 0.3929 MAKTHTFFIYSILLHITITKTEQCKILLPQQFDNTISNKFHNDPATIQHASNDYGNMVHEFPVAVFHPSSIQDIITLIKISYNSTVPFSIAARGQGHSTNGQAMAGDGVVVDMASFRKERKEVAISVSEDPMIGYYVDVGGEQVWIDVLYETLLHGVAPVSWTDYLYLTVGGTLSNAGISGQTFRYGPQITNVHELDVITGKRRFS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0358 206 Pfam FAD binding domain 63 201 IPR006094 GO:0050660
Psa4g0358 206 Gene3D - 36 128 IPR016167 -
Psa4g0358 206 ProSiteProfiles PCMH-type FAD-binding domain profile. 58 206 IPR016166 GO:0071949
Psa4g0358 206 PANTHER GULONOLACTONE OXIDASE 17 204 - -
Psa4g0358 206 PANTHER CYTOKININ DEHYDROGENASE 3 17 204 - -
Psa4g0358 206 SUPERFAMILY FAD-binding/transporter-associated domain-like 37 201 IPR036318 GO:0050660
Psa4g0358 206 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 62 97 IPR006093 GO:0016491
Psa4g0358 206 Gene3D - 129 205 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0358 Psa-Chr4 21563940 21565649 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0358 K00279 - gmx:100787676 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0358 4 21563940 21565649 Psa1g3188 1 280673863 280675307 PCT