Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3188 ATGTTCATACCAAAATCAAGAATCATGGATTTTAACTCAGGTGTTTTCAAGAACATAATTCAAAAAAGAAACATCACCACAGGACCTGTCTTGGTCTATCCAATGAATAGAAACAAGTGGGACAATAAGATGTCAGCAACAATACCAGATGATGAGGATGAAATCTTTTATGCTGTTGGATTCTTGCACTCAAGTAGATTTGATAATTGGAAAGCCTTTGATGCTCAAAACATCGAAATTTTGAAATTTTGCAATGATGCTGAAATTAAGTATAAGTTATATCTTCCCCACTACAGCACACAGGAAGAGTGGAGAAACCATTTTGGACCTAAAAAATGGAAAAGTTTTGTACAAAGAAAATATCAGTTTGATCCTAGAATGATTCTATCACCAGGACAAAGAATCTTTAACAATAATTAA 420 0.331 MFIPKSRIMDFNSGVFKNIIQKRNITTGPVLVYPMNRNKWDNKMSATIPDDEDEIFYAVGFLHSSRFDNWKAFDAQNIEILKFCNDAEIKYKLYLPHYSTQEEWRNHFGPKKWKSFVQRKYQFDPRMILSPGQRIFNNN* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3188 139 Gene3D - 1 94 IPR016170 -
Psa1g3188 139 Gene3D - 95 136 IPR016167 -
Psa1g3188 139 PANTHER OXIDASE, PUTATIVE-RELATED 1 138 - -
Psa1g3188 139 SUPERFAMILY FAD-linked oxidases, C-terminal domain 1 137 IPR016164 GO:0003824|GO:0050660
Psa1g3188 139 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 1 136 IPR015345 GO:0009690|GO:0019139|GO:0050660
Psa1g3188 139 PANTHER GULONOLACTONE OXIDASE 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3188 Psa-Chr1 280673863 280675307 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3188 K00279 - gmx:100797928 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0358 4 21563940 21565649 Psa1g3188 1 280673863 280675307 PCT