Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0311 ATGTGGAGTTCTTTCTGGCGATCCAGAGATCGTTTCTCCTTGGATCAACTCAGTTACTTAACTGATCAATTGGCGAAAATTCAAGTTGTTACAGATGATAATAAGGATTTTGTTATTGAGGCTCTGAGATCGATTGCGGAGTTGATGACATATGGCGATCAGCATGACTCGAGCTATTTTGAATTCTTCATGGAAAAACAAGTCATGGGCGAGTTTGTTCGTATACTTAAAATTAGCAAGATTGTTAGTGTTCCTCTTCAGTTGTTGCAAACAGTTAGCATTTTGGTCCAGAACTTAAGGAATGAACATGCTATATACTACTTGTTTAGTAACCAACATATAAACTACTTGATAACTTATTCGTTCGACTTTCAAAATGAAGAGCTGTTGTCTTACTACATATCCTTTTTAAGAGCGATAAGTGGAAAATTGAACAGGAATACGGTTTCGCTTCTTGTGAAGATTCACGGTGACGAAGTAGTTTCATTTCCACTGTATGTTGAGGCAATACGCTTTGCCTTTAATGAGGAGAACATGGTCCGCACTGCAGTACGAGCTGTGACCCTTAATGTTTATCACGTTGGAGATGACTCTGTAAATAGATACATATCCAGCGCACCTCACACAGATTATTTCTCAAACCTGATTTCATTTTTTAGGAAGCAGAGCATGGATTTAAATAAGTTGGTTTCTCATACACTGATAAATCCAGGCCCGGATTCAACCTCTACAATTATTGTTGCTATAGATGAAATTGAGGACAACCTATACTACTTCAGTGATATTGTCTCTGCTGGAATTCCTGATGTTGGTAGGTTAATTACTGACAGCATTCTGATGGTTTTGATATTTCCATTACTTCTTCCTTCTCTGAGGATATCAATTGATAATGACATGCAAAGTAGTTTTGTCACTTCTATCTACTTACTTTGTCGCATCTTGAGGATAATCAAAATTAAAGATTTGGCAAATACCATAGCTGCTGCTCTTTTTTATCCCTCAGAAGCCTTTACAAAAAGTTCTGGAGGTTTTCATCCAGACAGTGTTCTCATGCAAAATGGTTGTAGCAGTCCAAATTTGTCTTTAAGGGATGTTTTGCTTGCATATGTAGTAAAAGGAGATGATATACAAGTATTGGGTTCTTTGACTGTGCTAGCAACACTTCTGCAAACTAAAGAACTTGATGAATCAATGCTAGACGAGCTTGGAATTCTTCCACAACGCAAACAACACAAGAAGCTTTTATTGCAAGCTTTAGTCGGTGAGAGTTCAGGTGAAGAGGAACTTTTTTCTTCTAAAAGTAGTTTGACAAAGGATAGTACTGGTAGTGATATTGCTGTGTATCACAAAAAGATCAAGGATCAGTATGGAATATCTTTTCAGTCTTCTGATGTTGGAACTAGCCCTCATGAAAATAGATTTCAGGTGATTGATGCATTGGTGAGCCTTTTCTGCCGCTCTAACATATCTGCAGAGACACTATGGGATGGTGGTTGGCTTTTGCGTCAGTTGCTTCCTTACAGTGAATCAGAATTCAACAACCATCACCTTGAAGTTTTGAAAGTTTCTTACAAGACCTGTGCTTCTGCTCTTGTAGAGGAGGTTAAAGGCATCTGGACCGACTTACTTATTTCTGTTCTATGTGATGAATGGCGAAAGTGCAAAAAAGCAATGGAATCATCATCTCCTCCGAAAGAACCAAACTGCATGCTGTTGCAGCCACATCCACATAAATTTTCTTTAGAAGATAACACTCCAAAGGGATCATCACTTTCTGCAGGAGAAAGAATGCAGGAACTGGTGAAGGTATTTGTAGTACTGCACCAACTTCAATTATTCACTCTTGGGAGAGCTTTACCTGAGCAACCTCCAATTCACCCTCCCGGTGATCTTCCCGCAAATTGCCGTGCCCAGACTTCTGGGCTTGATGTATCCGGCCCAAAGGCAGGCACCGAAATCAGCCTTGTTAATGCTGTGCCTTGTAGAATTGCTTTCAAGAGTGGCAAAGAACACCATCTTTGCTTTCAAGCAATCTCTTTAGGAATATCTGGCTGGCTTCTTCTTGCAGAAGAATTGCCATCACAGAAGTCCCATGGAATTGTTCGGGTTGTTGCACCTTTGGCTGGGTGCAATCCCAGGGTTGATGATACACATTCATCATGGTTACACTTGCGGATCCGGTCATCCTCTTTACCCTTTCAAGATCCTGCCAAATCGAATGATCATGGGAGAATGAAAACAAAAAATTTGGTTGATGGAAGATGGACATTGGCGTTCAGGGATGAGGAGTCTTGCAAATCTGCTTTAGGGATGATCCTTGAAGAGATCTATTTTGTGAGTGATGAGGTTCATAGAAGGCTTAAACCTTTGTTCAACCTTGATACTACAAAAGATTTATCAAGCTCACATTTATGTGTTCCTGAGGATTCCTCTAACAGAATACTTCCCAAATCATTGTAA 2460 0.3976 MWSSFWRSRDRFSLDQLSYLTDQLAKIQVVTDDNKDFVIEALRSIAELMTYGDQHDSSYFEFFMEKQVMGEFVRILKISKIVSVPLQLLQTVSILVQNLRNEHAIYYLFSNQHINYLITYSFDFQNEELLSYYISFLRAISGKLNRNTVSLLVKIHGDEVVSFPLYVEAIRFAFNEENMVRTAVRAVTLNVYHVGDDSVNRYISSAPHTDYFSNLISFFRKQSMDLNKLVSHTLINPGPDSTSTIIVAIDEIEDNLYYFSDIVSAGIPDVGRLITDSILMVLIFPLLLPSLRISIDNDMQSSFVTSIYLLCRILRIIKIKDLANTIAAALFYPSEAFTKSSGGFHPDSVLMQNGCSSPNLSLRDVLLAYVVKGDDIQVLGSLTVLATLLQTKELDESMLDELGILPQRKQHKKLLLQALVGESSGEEELFSSKSSLTKDSTGSDIAVYHKKIKDQYGISFQSSDVGTSPHENRFQVIDALVSLFCRSNISAETLWDGGWLLRQLLPYSESEFNNHHLEVLKVSYKTCASALVEEVKGIWTDLLISVLCDEWRKCKKAMESSSPPKEPNCMLLQPHPHKFSLEDNTPKGSSLSAGERMQELVKVFVVLHQLQLFTLGRALPEQPPIHPPGDLPANCRAQTSGLDVSGPKAGTEISLVNAVPCRIAFKSGKEHHLCFQAISLGISGWLLLAEELPSQKSHGIVRVVAPLAGCNPRVDDTHSSWLHLRIRSSSLPFQDPAKSNDHGRMKTKNLVDGRWTLAFRDEESCKSALGMILEEIYFVSDEVHRRLKPLFNLDTTKDLSSSHLCVPEDSSNRILPKSL* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0311 819 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
Psa4g0311 819 PANTHER PROTEIN TRANSPARENT TESTA 9 340 802 - -
Psa4g0311 819 PANTHER PROTEIN TRANSPARENT TESTA 9 1 341 - -
Psa4g0311 819 PANTHER UNCHARACTERIZED 1 341 IPR039272 -
Psa4g0311 819 PANTHER UNCHARACTERIZED 340 802 IPR039272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0311 Psa-Chr4 19615039 19626545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0311 K19513 - gmx:100786267 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0311 4 19615039 19626545 Psa1g3255 1 285780029 285794563 PCT