Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3255 ATGTGGTTTTCCTTCTGGAGATCCAAAGATCGTTTTTCCTTGGATCAACTTAGGTACCTAGCTGATCAGTTAACAAAAGTTCATATAGTTAATGAGGTTAATAAGGATTTTGTTATTGAGGCTCTGAGATCAATCGCGGAGTTGATAACATATGGTGACCAACACGACCCAAGCTTTTTTGAATTTTTCATGGAAAATCAAGTTGTGGGAGATTTTGTACGTGTTCTAAAACTTAGCAGGACTATTAGTATTCCACTTCAGTTGCTACAAACTGTTAGCATTATGATCCAAAACCTTCAAAGTGAACATGCTATATACTATATGCTTAGTAATGAACATATGAACTTCCTAATTACATACTCATTTGATTTCCGCAATGAAGAGCTGTTGTCATACTACATATCTTTTTTAAGAGCGATAGGTGGGAAATTAAACAAGAATACTATTTCTTTGCTTGTGAAGACCCGCAACGATGAAGTAGTTTCATTTCCACTATATGTTGAGGCAATACGCTTTGCCTTTCATGAGGAGAACATGATTCGTGCTGCTGTACGTGCTGTGACCCTTAATGTTTACCATGTTGGAGATCACTCTGTTAATAGATATATAACTAGCGCACCTCACACAGATTACTTCTCAAATCTGGTTTCTTTTTTTAAGAAGCAGTGTATGGATTTAAACAAACTGATCTCTGATACGCTGAAAAATCCAGTCCCAGATTCAAAGGCTACCATTACGGCTGCTGTAGATGAAATTGAGGATAACCTATATTACTTTAGTGATGTGATCTCTGCGGGAATTCCTGATGTTGAAAGGTTAATAACAGACAGCATTTTGACGCATCTGATTTTTCCAGTACTTCTTCCTTCCCTAAGGATAGTGGCTGCTAATGGTATACAAAGCGATGTTGTCACTTCTCTCTACTTACTTTGTTGCATCTTGAGGATAGTCAAGATCAAAGATTTGGCAAATACAATAGTTGCTGCACTTTATTATCCCTTAGAGTCCCTTACAAAATGTTTTGGGGGTCAAGACAATGGAATGATACCTGATCATGGTTTTACTTCTGAAGGCGATGGGATAGCTAATGATAGTCTCGCCAAGGATAAAAAGAAAGGCTTGGTAGTCAATGTTCCATGCTCACCTAGTTCTTCAGGTTTTCATCCACAGAGTATCACCATGCTAAATAATGGTAGCAGTTCAAATGTGGCTTTGAGGGAAGTTTTGCTTGAATATGTAACTGACGGGGCTGATTTACAAGTTTTTGGTTCCTTGAGTGTGCTTGCCACTCTGCTGCAAACTAAAGAACTTGACGAGTCAATGCTAGATGGGCTTGGAATTCTTCCACAACGCAAACAGCAAAAAAAGCTCTTATTGCAAGCTTTGGTTGGTGAGGCTTCAGAGGAAGAACAACTTTTTTCTTCTGAAACTAGTTTGACAAGAGATGGCATTGCATGTGAGCTTGATGTTTATCTTGAAAAGATCAAGGAGCAATATGGGGTATCTTTTCAGCTTCCAAATGTGATACCAAGCCCTCGTGTACCTAGATTTCAGGTGCTAGATGCATTAGTGAGCCTCTTTTGCCGTTCTAATATATCTGCAGAGACACTATGGGATGGCGGCTGGCTTTTACGCCAGTTGTTTCCTTACAGTGAGTCAGAATTCAACAACAACCACCTCAAATTGCTGAAAATTTCATACGAGAATTCTGCCTGTGCTCTTGAAAAGGAAGTTAAAGGTTTCTGGCCTGACCTTCTTATTACCGTTCTTTGTGATGAGTGGAGAAAGTGCAAAAGAGCAATGGATTCCTCATCCCCTCCCAAAGAACCAAAGTGTATGCTTTTTCCGCCTAGGATGTTCTTTTCAGAAGAAGATATACCTGAGGGATCATCATTTACTGCTGGAGAAAGAATGCACGAGTTGGTGAAGGTATTTGTACTTCTGCACCAACTTCAGATATTCACTCACGGTAGAACTTTGCCTGAGCAACCTCTTATTTATCGTCCTTATGATCATCGTATGGATTCTCGAGCCCAGAGTTCTGGACTTGTGTCAGTCCCAAAGCCAGGCACCGAAATGAACCTTGTTAATGCCGTGCCTTGTAGAATTGCTTTCGAGAGGGGCAAAGAGCGCCATTTTTGTTTTCTAGCAATCTCTGTAGGAACATCTGGTTGGCTTGTGCTTGCAGAAGAATTGCCTCTGAAGAAGCCCTATGGAATTGTTCGGGTTGCTGCACCTTTGTCTGGGTGCAATCCCAGGATTGATGATAAGCATTCAAAATGGTTACACCTGCGGATCCGGCCTTCTGCTTTACCTTTTCTGGATCCTGTCAAGTACAGTCCACAAGGGAAGTTAAAGACAAAAGCTTTTGTTGATGGAAGATGGATATTGGCGTTCAGGGACGAGGAGTCTTGCAAAACTGCTTTTCTCATGATTCTTGAAGAGATTAATTATCTATGCGACGAGGTTCATAGAAGAATAAAACCTTTGCTGAAGCTTGAAACCGTGCTAGACATATCAAGTTCGTCTGCTCCTGTTTCAGAGGATTCCTCTTCACATACAACACCTCCCCATTCATTAATAATGAAAAAAAAATTCTTTTCCTTATTGTCCCGTGTGATCGTCTTTATGTGCTCCCCAGTGCTAATGACTGTGAAATACAAGGGAAATGACGACATCATTGCAAACCGAACCACAAATAGAGTTGCAAACCAATCTAAGGTTGTTGAGACTGCGTCCTCCCAACTACGGGTTGAACAAGTAGTTCCAATCGGTTCACATCAGAAACAGTTGACTGAGCAGGAAAAATTCCGCGCACCCTGGAACACCCGACGCCGAGCAGTGAGATCAGACGAGCAACCTATAGATGATGCTAAGGTTGTTCATGCTTAG 2892 0.4094 MWFSFWRSKDRFSLDQLRYLADQLTKVHIVNEVNKDFVIEALRSIAELITYGDQHDPSFFEFFMENQVVGDFVRVLKLSRTISIPLQLLQTVSIMIQNLQSEHAIYYMLSNEHMNFLITYSFDFRNEELLSYYISFLRAIGGKLNKNTISLLVKTRNDEVVSFPLYVEAIRFAFHEENMIRAAVRAVTLNVYHVGDHSVNRYITSAPHTDYFSNLVSFFKKQCMDLNKLISDTLKNPVPDSKATITAAVDEIEDNLYYFSDVISAGIPDVERLITDSILTHLIFPVLLPSLRIVAANGIQSDVVTSLYLLCCILRIVKIKDLANTIVAALYYPLESLTKCFGGQDNGMIPDHGFTSEGDGIANDSLAKDKKKGLVVNVPCSPSSSGFHPQSITMLNNGSSSNVALREVLLEYVTDGADLQVFGSLSVLATLLQTKELDESMLDGLGILPQRKQQKKLLLQALVGEASEEEQLFSSETSLTRDGIACELDVYLEKIKEQYGVSFQLPNVIPSPRVPRFQVLDALVSLFCRSNISAETLWDGGWLLRQLFPYSESEFNNNHLKLLKISYENSACALEKEVKGFWPDLLITVLCDEWRKCKRAMDSSSPPKEPKCMLFPPRMFFSEEDIPEGSSFTAGERMHELVKVFVLLHQLQIFTHGRTLPEQPLIYRPYDHRMDSRAQSSGLVSVPKPGTEMNLVNAVPCRIAFERGKERHFCFLAISVGTSGWLVLAEELPLKKPYGIVRVAAPLSGCNPRIDDKHSKWLHLRIRPSALPFLDPVKYSPQGKLKTKAFVDGRWILAFRDEESCKTAFLMILEEINYLCDEVHRRIKPLLKLETVLDISSSSAPVSEDSSSHTTPPHSLIMKKKFFSLLSRVIVFMCSPVLMTVKYKGNDDIIANRTTNRVANQSKVVETASSQLRVEQVVPIGSHQKQLTEQEKFRAPWNTRRRAVRSDEQPIDDAKVVHA* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3255 963 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
Psa1g3255 963 PANTHER PROTEIN TRANSPARENT TESTA 9 1 843 - -
Psa1g3255 963 PANTHER UNCHARACTERIZED 1 843 IPR039272 -
Psa1g3255 963 MobiDBLite consensus disorder prediction 943 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3255 Psa-Chr1 285780029 285794563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3255 K19513 - gmx:100786267 1341.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3255 1 285780029 285794563 Psa1g3255 1 285780029 285794563 ECH
Psa4g0311 4 19615039 19626545 Psa1g3255 1 285780029 285794563 PCT