Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2011 ATGGGTGTTTCGGTTGATTCACCATCACAAAAGGGTTCATGGAGATTTTTCACTAGAAAGAAGCAGGTTGATTCTGCAAGTAAAAACACTAAACCTCTGCTTGCAAAGGAGTTAACTATTTCTCATCTTGTTGCAATTGGTGTTGGTTCAACAATTGGTGCTGGAGTGTATGTTTTGGTTGGAACAGTAGCTAGAGAGCATTCTGGACCAGCTTTGACTATTTCTTTTCTGATTGCTGGGTTTGCAGCTGGTCTTTCTGCTTTTTGCTATGCCGAGTTGGCTTGTCGATGTCCTTCTGCTGGAAGCGCGTATCACTATTCATACATATGTCTTGGAGAAGGTGTTGCTTGGTTGATTGGCTGGGCCTTGATACTGGAATATACAATTGGTGCCGCAACTGTTGCTCGTGGCGTAACCCCTAATCTTGCTCCAATTTTTGGTGGTCTGGACAATCTACCGTTCTTTTTGTCGCGCCAGCATATTCCTGGGATCGATATTATTGTGGACCCGTGTGCAGCAATTTTGGTATTGCTTGTTACAGGACTACTATGTTTGGGGATCAGGGAGAGCACAGTGGTACAAGGCATAGTAACGTCGGTGAATGTATGTGCATTGCTTTTTGTGGTTATAGCTGGTGGTTACGTAGGATTCAAGTCTGGATGGGCTGGATATGAACTTCCTACAGGATATTTTCCATTTGGGGTTGATGGGATGCTTGCGGGTTCCGCAACAGTCTTCTTTGCATACGTAGGTTTTGATGCAGTTGCCAGTACTGCCGAAGAGGTGAGAAATCCTCAGCGAGATTTGCCACTAGGCATCGGTGCTTCATTGTTTCTATGTTGTGGAATATATATGCTGGTCGCCATTGTTGTCGTTGGTTTAGTACCTTATTATGCAATTGATCCTGATACACCGATATCATCTGCATTTGCTGTCCATGGGATGCAATGGACCGGTTACATTATAAATGCCGGAGCTTGCACAGCTCTCATCTCAGCATTGATGGGTGGGATACTTCCACAGCCACGAATTTTGATGGCAATGGCAAGAGATGGACTACTGCCACCATTTTTTGGTGACATAAATAAGCATACTCAAGTTCCTGTGAAGGGCACAATAATTACCGGCCTTGCCGCTGCAGTCTTAGCATTTTTTATGGAAGTCTCTGAACTTGCAGGGATGGTTAGTGTGGGAACTCTTTTAGCATTCACCATGGTGGCGATATCTGTGCTGATCCTAAGATATATTCCTCCAAATAAAGTCCCAGTGCCTCCTTCTCTCCAGGATTCAATCGAAGTGGTCGAAGTCGTAAATGAAGACGAAAGTGTCGGTACTTCTGAAGACACAAAACCTTCAGATGTTATGCAAGATTTTCCCATTGATCATCCTCTTATTTCTAATCACCTTGTCATAATAGGCAACTATATAAATGAGGGTAATAGAAGAAGACTTGTTCGACGGACCATAGCACTCATATGCTTGGGGGCGTTCGTCCTCACATTTGCAGCTTCATGTTTAACTTTTCTTAGTTATGTTCGCTTCGCATTGTGTGGAGCTGGAGGCATTCTTCTTGTGTTTGGATTTGTCTTCCTATCCTTAATAGATCAAGATGAAGCGAGGCACGACTTTGGTCACTCTGGAGGTTTCATATGCCCATTTGTGCCATTGCTGCCTATAGCTTGCATTCTCATCAATTCCTATCTGCTAATTAATCTCGGGTAA 1722 0.4373 MGVSVDSPSQKGSWRFFTRKKQVDSASKNTKPLLAKELTISHLVAIGVGSTIGAGVYVLVGTVAREHSGPALTISFLIAGFAAGLSAFCYAELACRCPSAGSAYHYSYICLGEGVAWLIGWALILEYTIGAATVARGVTPNLAPIFGGLDNLPFFLSRQHIPGIDIIVDPCAAILVLLVTGLLCLGIRESTVVQGIVTSVNVCALLFVVIAGGYVGFKSGWAGYELPTGYFPFGVDGMLAGSATVFFAYVGFDAVASTAEEVRNPQRDLPLGIGASLFLCCGIYMLVAIVVVGLVPYYAIDPDTPISSAFAVHGMQWTGYIINAGACTALISALMGGILPQPRILMAMARDGLLPPFFGDINKHTQVPVKGTIITGLAAAVLAFFMEVSELAGMVSVGTLLAFTMVAISVLILRYIPPNKVPVPPSLQDSIEVVEVVNEDESVGTSEDTKPSDVMQDFPIDHPLISNHLVIIGNYINEGNRRRLVRRTIALICLGAFVLTFAASCLTFLSYVRFALCGAGGILLVFGFVFLSLIDQDEARHDFGHSGGFICPFVPLLPIACILINSYLLINLG* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2011 573 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 9 573 - -
Psa3g2011 573 Gene3D Amino acid/polyamine transporter I 34 428 - -
Psa3g2011 573 PANTHER PROTEIN, PUTATIVE-RELATED 9 573 - -
Psa3g2011 573 Pfam C-terminus of AA_permease 549 572 IPR029485 -
Psa3g2011 573 PIRSF AA_transporter 468 571 - -
Psa3g2011 573 PIRSF AA_transporter 17 424 - -
Psa3g2011 573 Pfam Amino acid permease 43 420 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2011 Psa-Chr3 179077358 179081683 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2011 12 573 Organic Solute Cotransporters AT5G36940 64.437 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2011 K13863 - gmx:100784895 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2011 3 179077358 179081683 Psa1g2052 1 149231466 149236506 PCT