Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2052 ATGGGCTTTGCTGGTTTTGATTCACAAGAGGGTAATGGTAGTAGTACTACTACTACTACTACTAATCATGGAGGACAACATGGTTCATCGTGTTCATGGAGGTTTCTAACAAGGAGGAAGAAGGTTAATTCTCATGTTGAGGACAACCACAACAATTCTCATGGAGTACAACTTGCTAAGGAGTTAACTATTCCTCATCTCATGGCAGTTGGGGTAGGTGCAACAATTGGTGCTGGTGTCTATGTTCTAGTTGGAACGGTAGCTAGGGAACATGCTGGACCTGCTTTACCACTTTCATTTATGATTGCTGGACTAGCAGCTGCTCTTTCAGCTCTTTGCTATGCCGAGTTGGCTAGTCGCTTTCCTTCTGCTGGAAGTGCTTATCACTATGCTTACATATGTCTTGGTGAAGGGGTTGCTTGGTTGATTGGTTGGTCCTTAATTCTGGAATACGGGATTGGTGGAGCTGCTGTTGCTCGTAGCATAACTCCTAATTTGGCGGCACTTATTGGCGGTGTTGACAACTTGCCAGCATTTTTATCCTATCAACATATTCCTGGGATTGATATTGTTGTAGACCCACTTGCAGCAATTATGGTATTCATAGTTACTTGGGTCCTCTGTACTGGGATCAAAGAGAGTACAATGGTACAAAGTATAGTCACATCAGTGAATATATGTGCTTTGATGTTTGTCATAGTAGTTGGCGGTTATTTAGGGTTCAAATCTGGATGGGTTGGATATAAACTCTCAACAGGGTATTTTCCATTTGGGATAGATGGAATGGTTGCTGGTTCTGCAACAGCTTTTTTTGCATACATAGGTTTTGATGCAGTTGCCAGCACTGCTGAAGAGGTGAAAAACCCTCAAAGAGATTTACCACTAGGAATTGCTGCTTCGTTGTCTCTATGTTGTGGACTCTATATGATAGTATCCATTGTTGTTGTTGGTTTAGTACCTTACTATGATATCAATCCTAACACCCCTATATCCTCTGCATTTGCTGACAATGGATTGCAATGGGCAGCATACATTATAAATGCTGGGGCTATTACAGCACTGTGTTCATCATTGCTTGGTGGAATGTTGCCTCAGCCAAGAATTTTGATGGCTATGGGAAGGGATGGACTGCTTCCACCATTTTTTTCGGACATAAATAAGCACAGCTATGTTCCTGTAAAGAGTACCGTAGTTACTGGCCTTGTTTCTGCAGCCTTGGCGTTTTTCATGGATGTCTCACAACTTGCTGGGATGGTTAGTGTAGGTACTCTTCTTGCATTCACCATATCAGCAATAACTGTGTTGATAGTAAGATATATCCCACCAATTGAGGTTCCATTGCCCCTTTCTCTACAAGAACCAATTGATGCAGAGTCAACCGAGTATGATTGGAGCCATTTGGAAACATTAGAAAAAGATGCAAAAAAGAAAACCTTAGTTGTTCAAGAGGATGTATCAGTTGATTATTCCCTTATTCCCAAAAATCATGCAATAGACACATTTGTACATAATGGAAATAGGAAAGAAACTGTTGGGTGTGTAATAGCATTCATATGCTTAGGTGTATTTATCCTTACATTTGCAGCTTCTTCTACACACTTTCTCAGTTCAGTTAGATTTACATTATGTGGAATCAAGATGATGCAAGGCACAAGTTTGGAAACTCTAGAGGTTTCACATGTCCTTTGGTGCCACTGCTACCTATAA 1707 0.4101 MGFAGFDSQEGNGSSTTTTTTNHGGQHGSSCSWRFLTRRKKVNSHVEDNHNNSHGVQLAKELTIPHLMAVGVGATIGAGVYVLVGTVAREHAGPALPLSFMIAGLAAALSALCYAELASRFPSAGSAYHYAYICLGEGVAWLIGWSLILEYGIGGAAVARSITPNLAALIGGVDNLPAFLSYQHIPGIDIVVDPLAAIMVFIVTWVLCTGIKESTMVQSIVTSVNICALMFVIVVGGYLGFKSGWVGYKLSTGYFPFGIDGMVAGSATAFFAYIGFDAVASTAEEVKNPQRDLPLGIAASLSLCCGLYMIVSIVVVGLVPYYDINPNTPISSAFADNGLQWAAYIINAGAITALCSSLLGGMLPQPRILMAMGRDGLLPPFFSDINKHSYVPVKSTVVTGLVSAALAFFMDVSQLAGMVSVGTLLAFTISAITVLIVRYIPPIEVPLPLSLQEPIDAESTEYDWSHLETLEKDAKKKTLVVQEDVSVDYSLIPKNHAIDTFVHNGNRKETVGCVIAFICLGVFILTFAASSTHFLSSVRFTLCGIKMMQGTSLETLEVSHVLWCHCYL* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2052 568 MobiDBLite consensus disorder prediction 8 26 - -
Psa1g2052 568 Pfam Amino acid permease 67 443 IPR002293 GO:0016020|GO:0022857|GO:0055085
Psa1g2052 568 PANTHER PROTEIN, PUTATIVE-RELATED 27 547 - -
Psa1g2052 568 MobiDBLite consensus disorder prediction 1 26 - -
Psa1g2052 568 Gene3D Amino acid/polyamine transporter I 58 451 - -
Psa1g2052 568 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 27 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2052 Psa-Chr1 149231466 149236506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2052 34 545 Organic Solute Cotransporters AT5G36940 62.062 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2052 K13863 - gmx:100820395 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2011 3 179077358 179081683 Psa1g2052 1 149231466 149236506 PCT