Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1738 ATGGTAGGAAGCATTTTGGGAAAGATAAACAATAACACACACTCAAATGGATCATCTCATAATCATAACAATGGATTAGAAGAGAAGCTTGATGAGTTTAGAAGCCTAATTGGCAAAACCAATGGTGACACTTTGAGAATTGTGAGTATTGGAGCTGGTGCTTGGGGAAGTGTTTTTGCAGCACTTTTACAAGACAGTTATGGACAATTTAGAGACAAAGTACAAATAAGAATATGGAGAAGACCGGGAAGAAAAGTCGATAGAGAAACGGCGAAACATCTCTTTGAAGTTATCAATTCAAGAGAAGATGTTTTAAGAAGGTTGATAAGACGATGCGCGTATCTGAAATACGTCGAAGCAAGACTCGGTGATAGGACATTGTTTGCTGATGAGATTCTTAAAGATGGTCTTTGTTTGAACATGATTGATACTCCTGTTTGTCCTTTGAAAGTTGTTACTAATTTGCAAGAAGCTGTTTGGGATGCTGATGTTGTTGTTAATGGTTTGCCTTCGACGGAAACTCGCGAGGTTTTCGAAGAGATTAGTAAGTATTGGAAAGAGAGGATTAGTGTTCCTGTTATCATTTCTTTGTCTAAAGGTATTGAAGCTGCTTTGGAGCCTGTTCCTCATATTGTTACTCCTACAAAAATGATTCATCAAGCAACTGGAGTGCCTATGGAGAACATACTTTATCTTGGTGGTCCAAATATTGCATCAGAAATCTACAACAAAGAGTATGCAAATGCTAGAATTTGTGGAGCTGAGAAATGGAGAAAACCTTTAGCAAAGTTTCTTAGACAACCACATTTTATTGTATGGGACAATAGTGACCTTGTCACACATGAAGTCATGGGTGGATTGAAAAATGTCTATGCAATTGGAGCTGGAATGGTAGCATCCCTTACCAATGAGAGTGCTACTAGCAAATCAGTGTACTTTGCACACTGTACTTCCGAGATGATATTCATCACTCACTTGTTAACCGAAGAGCCTGAGAAACTTGCTGGACCATTACTGGCCGACACATACGTCACGTTGTTAAAAGGGCGTAACGCGTGGTACGGACAGATGTTAGCTAAGGGTGAACTTAGCCCTGACATGGGCGACAGAATTAGCGGCAAAGGAATGATTCAGGGAGTATCTGCGGTGGAGGCGTTCTTCGAACTTTTGAGCCAATCAAGCTTGAATGTGTTACATCCTGAAGAAAAAATACATGTTGCTCCTGTTGAGCTTTGCCCTATCTTGAAGACACTCTATAAAATATTGATATCCAGGGAACAATCAACACAAGCTATTCTGAAAGCTCTGAGGGATGAAAATCTGAATGATCCACGGGAACGCATTGCGATTGCGCAAAGTCACGCTTTTTACAGACCTTCACTTCTTGGACAACAGTGA 1398 0.4027 MVGSILGKINNNTHSNGSSHNHNNGLEEKLDEFRSLIGKTNGDTLRIVSIGAGAWGSVFAALLQDSYGQFRDKVQIRIWRRPGRKVDRETAKHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGLCLNMIDTPVCPLKVVTNLQEAVWDADVVVNGLPSTETREVFEEISKYWKERISVPVIISLSKGIEAALEPVPHIVTPTKMIHQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVASLTNESATSKSVYFAHCTSEMIFITHLLTEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDRISGKGMIQGVSAVEAFFELLSQSSLNVLHPEEKIHVAPVELCPILKTLYKILISREQSTQAILKALRDENLNDPRERIAIAQSHAFYRPSLLGQQ* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1738 465 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 1 464 - -
Psa3g1738 465 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 277 IPR036291 -
Psa3g1738 465 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 49 66 IPR006168 GO:0004367|GO:0006072|GO:0009331
Psa3g1738 465 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 270 294 IPR006168 GO:0004367|GO:0006072|GO:0009331
Psa3g1738 465 Gene3D - 27 108 - -
Psa3g1738 465 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 277 431 IPR006109 GO:0004367|GO:0005975
Psa3g1738 465 Gene3D - 139 273 - -
Psa3g1738 465 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 1 464 - -
Psa3g1738 465 Gene3D - 277 437 IPR013328 GO:0016491
Psa3g1738 465 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 277 432 IPR008927 -
Psa3g1738 465 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 149 251 IPR011128 GO:0016616|GO:0046168|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1738 Psa-Chr3 154226419 154228952 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1738 1 464 Acyl Lipid Metabolism Gene Families AT2G41540 86.422 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1738 K00006 - gmx:100810871 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1738 3 154226419 154228952 Psa3g1738 3 154226419 154228952 ECH
Psa3g1738 3 154226419 154228952 Psa6g2653 6 204610239 204614362 PCT