Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1700 ATGTCTAGCGCTACAAAAGGGTTGGAACCAGCATTCCAAGGAGTAGGCCAAAAAGTAGGGACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCATTGCCAAAATCTGATTATGGAAAATTCTACATGGGAGATTCTTACATTATCTTGCAGACAGCACAAGGCAAAGGAGGCAATTATTTGTTTGATATTCACTTCTGGATCGGAAAGGATACAAGTCAGGATGAAGCTGGAACTGCAGCCATTAAAACTGTTGAACTTGATGCATCCCTTGGAGGACGTGCAGTGCAGCACAGGGAAATTCAAGGGCATGAGTCTGACAAGTTTTTGTCATACTTTAAGCCTTGTATTATACCATTAGAAGGAGGTGTTGCATCTGGCTTCAGAACACCAGAAGAAGAGGAGTTTGAAACACGTTTGTATGTATGCAAAGGAAAAAGAGTTGTCAGAATAAAACAGATCCCTTTTGCACGGTCTTCGTTGAATCATGATGATGTATTCATCTTAGACACTAAGGAGAAGATTTATCAATTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCAAAGGCTTTGGAAGTTATTCAGCTGTTGAAGGAAAAGTATCATGAAGGGACATCCAGTGTTGCAATTGTTGATGATGGAAAGTTGGATACCGAGTCAGACTCAGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTCATCAGCGAAGATGATATTGTTCCAGAGACCATTCCTGCTCAACTTTACAGTATTGCTGATGGTGAGGCCAAGTCTGTGGAAGGTGAACTCTCTAAGTCACTGTTGGAGAACAACAAATGCTATTTATTGGACTGTGGTGCTGAGGTGTTTGTCTGGGTTGGCCGAGTAACACAAGTTGATGAAAGAAAAGCTGCTTGTCAAGCTGCTGAGGACTTTGTTACAAGTCAAAAAAGGCCAAAAGCTACAAGGATAACAAGGGTTATTCAAGGTTATGAGACACATTCATTTAAATCCAACTTTGATTCTTGGCCATCAGGATCTGCTACCACTGCTGGTGCCGAGGAAGGAAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTATGGGTGTTAAGGGAGCTGCAAAAAGTACTCCAATTAATGAGGAAATTCCACCTTTGCTTGAAGCAGGTGGAAAATTGGAGGTATGGATAATCAATGGAAGTGCTAAGACTCCATTACCTAAGGAAGATAATGGTAAATTTTATAGTGGAGATTGTTACATAGTACTTTACACTTATCACTCTGGTGAGAGGAAGGAAGACTACTTCTTGTGCTGTTGGTTCGGAAAACACAGCATTGAGGAGGACCAAAAGATGGCTACTCGGTTGGCTACTACAATGTCCAACTCACTAAAGGGTAGACCTGTTCAGGGTCGCTTATTTGATGGTAAAGAATCACCACAGTTTGTCGCGCTTTTCCAACCTATGGTGGTCCTCAAGGGAGGTTTGAGCTCTGGTTACAAAAAGTTAATTGCGGAGAAAGGTTTGCCAGATGAGACTTACACAGCAGAGAGTATTGCTCTTGTTCGGATTTCTGGAACATCTACTCATAATAATAAAACAATGCAAGTCGACGCAGTGGCAACATCATTGAATTCTACCGAGTGTTTTCTTCTGCAATCTGGCTCAACAGTTTTTACTTGGCATGGCAACCAATCTTCCATTGAACAGCAGCAGCTTGCAGCCAAAGTTGCTGAATTTTTAAGGCCAGGAATTGCTTTAAAGCATGCTAAAGAAGGCACAGAAACCTCAGCTTTCTGGTCTGCTGTAGGAGGAAAACAAAGTGTCACTAGCAAAAAAGTCACTAATGACATTGTTAGAGACCCACATTTGTTCACTTTGTCATTTAATAAAGGAAAATTACAGGTAGAAGAGCTTTACAACTTTTGCCAGGATGATCTGTTAACAGAAGATATCCTCGTACTTGACACGCATGCAGAAGTGTTTGTTTGGATTGGCCAGTGTGTGGACCCAAAAGAAAAGCAAAATGCTTTTGAAATCGCCCAGAAATACATAGAAAAGGCTGCATCTCTGGAGGGACTATCTCCTCAAGTACCACTATATAAAGTAACTGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTTCTTGGGATCATGCAAAATCTACGGTTCAAGGAAACTCCTTCCAGAAAAAGTTGGCATTGCTATTTGGGATTGGTCATTCTGTAGAGGAAAAATCTAATGGATCAAGTCAAGGCGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCCTTAAATAATGCATTTAATTCATCTCCCGAGACAGCACCCAGTACTGATAGATTGAATAGCTTAAATCAAGGAGGACCGAGGCAAAGGGCAGAAGCTTTAGCTGCCTTAAACTCTGCCTTCAGTTCATCATCCGGAACTAAAGTTGTTACACCTAGGAAATCTCCAAGAGGTCAAGGATCACAAAGAGCAGCTGCAGTAGCTGCTCTTTCTAACGTTCTCACTGCTGAAAAGAAGAAACAATCACCTGACAGTTCTCCTATGGCAAGCAGTAGTCCTGTTGTTGAAAGTAATACTCCCGATGCTAAAAGTGAAACTGCCCCTTCTGAATTGGAAGGTCCTGAAGAAGTTACAGAAACCAAGGAGGCAGAGGAACTTGCTCCTGAAACTGGTAGCAATGGAAGTTCAGAAACAAAACTAGAAGACGTGGAGGATGGAAATGATAACCAAAATAGTCAAAGTGTCTTCACTTATGAGCAATTAAAGGCTAAATCTGGGAGTCATCTGTCTGGAATTGATCTTAAACGCAGGGAGGCTTATCTGTCAGAAGAAGAGTTTCAAACTGTGTTTGCGATATCAAAAGAAGCATTCTCTAAGTTACCAAGATGGAAGCAAGACATGCTGAAAAGAAAAGTTGATTTGTTCTAG 2946 0.4148 MSSATKGLEPAFQGVGQKVGTEIWRIENFQPVPLPKSDYGKFYMGDSYIILQTAQGKGGNYLFDIHFWIGKDTSQDEAGTAAIKTVELDASLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFRTPEEEEFETRLYVCKGKRVVRIKQIPFARSSLNHDDVFILDTKEKIYQFNGANSNIQERAKALEVIQLLKEKYHEGTSSVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIVPETIPAQLYSIADGEAKSVEGELSKSLLENNKCYLLDCGAEVFVWVGRVTQVDERKAACQAAEDFVTSQKRPKATRITRVIQGYETHSFKSNFDSWPSGSATTAGAEEGRGKVAALLKQQGMGVKGAAKSTPINEEIPPLLEAGGKLEVWIINGSAKTPLPKEDNGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKHSIEEDQKMATRLATTMSNSLKGRPVQGRLFDGKESPQFVALFQPMVVLKGGLSSGYKKLIAEKGLPDETYTAESIALVRISGTSTHNNKTMQVDAVATSLNSTECFLLQSGSTVFTWHGNQSSIEQQQLAAKVAEFLRPGIALKHAKEGTETSAFWSAVGGKQSVTSKKVTNDIVRDPHLFTLSFNKGKLQVEELYNFCQDDLLTEDILVLDTHAEVFVWIGQCVDPKEKQNAFEIAQKYIEKAASLEGLSPQVPLYKVTEGNEPCFFTTYFSWDHAKSTVQGNSFQKKLALLFGIGHSVEEKSNGSSQGGPRQRAEALAALNNAFNSSPETAPSTDRLNSLNQGGPRQRAEALAALNSAFSSSSGTKVVTPRKSPRGQGSQRAAAVAALSNVLTAEKKKQSPDSSPMASSSPVVESNTPDAKSETAPSELEGPEEVTETKEAEELAPETGSNGSSETKLEDVEDGNDNQNSQSVFTYEQLKAKSGSHLSGIDLKRREAYLSEEEFQTVFAISKEAFSKLPRWKQDMLKRKVDLF* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1700 981 CDD gelsolin_S5_like 520 610 - -
Psa3g1700 981 CDD gelsolin_S4_like 387 488 - -
Psa3g1700 981 SUPERFAMILY Actin depolymerizing proteins 384 530 - -
Psa3g1700 981 MobiDBLite consensus disorder prediction 802 824 - -
Psa3g1700 981 Pfam Gelsolin repeat 643 714 IPR007123 -
Psa3g1700 981 Pfam Gelsolin repeat 151 206 IPR007123 -
Psa3g1700 981 Pfam Gelsolin repeat 268 337 IPR007123 -
Psa3g1700 981 Pfam Gelsolin repeat 537 584 IPR007123 -
Psa3g1700 981 Pfam Gelsolin repeat 407 484 IPR007123 -
Psa3g1700 981 Pfam Gelsolin repeat 29 111 IPR007123 -
Psa3g1700 981 Gene3D Villin headpiece domain 901 981 IPR036886 GO:0003779|GO:0007010
Psa3g1700 981 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Psa3g1700 981 SMART VHP_1 946 981 IPR003128 GO:0003779|GO:0007010
Psa3g1700 981 MobiDBLite consensus disorder prediction 874 892 - -
Psa3g1700 981 MobiDBLite consensus disorder prediction 773 793 - -
Psa3g1700 981 ProSiteProfiles Headpiece (HP) domain profile. 916 981 IPR003128 GO:0003779|GO:0007010
Psa3g1700 981 CDD gelsolin_S6_like 623 721 - -
Psa3g1700 981 MobiDBLite consensus disorder prediction 773 922 - -
Psa3g1700 981 SUPERFAMILY VHP, Villin headpiece domain 915 981 IPR036886 GO:0003779|GO:0007010
Psa3g1700 981 Gene3D Severin 246 358 IPR029006 -
Psa3g1700 981 PANTHER VILLIN-3-LIKE ISOFORM X1 1 981 - -
Psa3g1700 981 Gene3D Severin 389 519 IPR029006 -
Psa3g1700 981 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Psa3g1700 981 PANTHER VILLIN 1 981 IPR007122 GO:0051015
Psa3g1700 981 Gene3D Severin 520 612 IPR029006 -
Psa3g1700 981 CDD gelsolin_S3_like 254 343 - -
Psa3g1700 981 Gene3D Severin 7 131 IPR029006 -
Psa3g1700 981 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Psa3g1700 981 PRINTS Gelsolin family signature 412 428 IPR007122 GO:0051015
Psa3g1700 981 PRINTS Gelsolin family signature 438 456 IPR007122 GO:0051015
Psa3g1700 981 PRINTS Gelsolin family signature 471 491 IPR007122 GO:0051015
Psa3g1700 981 PRINTS Gelsolin family signature 534 554 IPR007122 GO:0051015
Psa3g1700 981 PRINTS Gelsolin family signature 594 613 IPR007122 GO:0051015
Psa3g1700 981 PRINTS Gelsolin family signature 646 668 IPR007122 GO:0051015
Psa3g1700 981 PRINTS Gelsolin family signature 675 694 IPR007122 GO:0051015
Psa3g1700 981 MobiDBLite consensus disorder prediction 841 871 - -
Psa3g1700 981 Pfam Villin headpiece domain 946 981 IPR003128 GO:0003779|GO:0007010
Psa3g1700 981 CDD gelsolin_S1_like 12 124 - -
Psa3g1700 981 Gene3D Severin 132 242 IPR029006 -
Psa3g1700 981 SUPERFAMILY Actin depolymerizing proteins 597 719 - -
Psa3g1700 981 SUPERFAMILY Actin depolymerizing proteins 511 613 - -
Psa3g1700 981 CDD gelsolin_S2_like 138 232 - -
Psa3g1700 981 SMART VILL_6 393 491 IPR007122 GO:0051015
Psa3g1700 981 SMART VILL_6 251 344 IPR007122 GO:0051015
Psa3g1700 981 SMART VILL_6 519 608 IPR007122 GO:0051015
Psa3g1700 981 SMART VILL_6 137 234 IPR007122 GO:0051015
Psa3g1700 981 SMART VILL_6 19 117 IPR007122 GO:0051015
Psa3g1700 981 SMART VILL_6 625 720 IPR007122 GO:0051015
Psa3g1700 981 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Psa3g1700 981 Gene3D Severin 616 737 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1700 Psa-Chr3 151299936 151310745 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1700 - - gmx:100803795 1636.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1700 3 151299936 151310745 Psa3g1700 3 151299936 151310745 ECH
Psa3g1700 3 151299936 151310745 Psa6g2720 6 211549296 211570872 PCT