Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0595 ATGAGAGGACCAGTGATGGTGAGTGGTGGATGCGGTGGTGGTGGTGTGAAGGGAAGAAGAGGAGGACGTGACGGCGGCGGCGGCGAGGAAGTTTCGCCGGCGGCGCTAATGTTGGCTGCTTTGAAGAAATCAATGGTGGCTTGTAGTGTGGAGAGTCCTGACGATGTAATCTCGGCAGTTCATCATCCAATGGAGATTGGATGGCCTACAAACGTGAAACATGTTAGCCATGTCACGTTTGATAGGTTTAATGGTTTTTTAGGTCTTCCTCTTGAGCTTGAGGTTCATGTTCCTGCTCCTGTTCCTAGTGCTAGTGTTAGTGTGTTTGGTGTGTCAGCAGAATCAATGCAATGTTCTTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTGCTACTGATGCAGGAAAGATTATACTCACAGGGAGGACTGAAGGCTGAAGGAATATTTCGTATAAATCCGGAAAACGGTGAAGAGGAACATTTGAGGGAGCAATTGAATAGCGGCATTGTGCCGAATGATATTGATGTTCATTGTTTGGCTGGTTTGATAAAAGCATGGTTTAGGGAACTTCCTTCTGGAGTTTTAGATGGACTTTCGCCGGAGGAAGTTCTTGAATGCAACACTGAAGAAGAATCTGTTGAGCTTGTGAAGGAGCTGAAACCAGTTGAATCAGCTCTGCTTAATTGGGCTATTGATCTCATGGCTGATGTCGTAGTTGAAGCCGAATATAATAAAATGGATGCTAGAAATATTGCAATGGTTTTCGCTCCAAATATGACTCAGATGTCTGATCCATTAACTGCTCTTATGCACGCGGTCCAAGTGATGAATTTACTTAAGACACTGATATTGAAGACACTTCGAGATCGCGAAGAGACATCATCAACCGAAGAATATTCATCCATGTCATCTCATTCATCAGACCGTCAATCAGAAGTAGATGACTATGACAGTCAACAAGAAATGGATACTAGTGGTGAATTCAAAAGAGCCAAATTAGATTATGATGATCATGCTGACTACAGCCACAACATTGAAGAGGCCGCTGCATCTAACTATAATGCGGAATCTGTTATATCAGTTACTGATACAAAAACGGAGGATTCTTGTTTGAGTTCCAGTTCTAGAGACGACTCGACAACAACGGAGGGATCGAACGATGAAACAACAAGTAGTCCATCGACAGAAAGTAAAGAAACCAACGATGTGGAGATGGTAAATAAATGCGGTGATTCTGTTTCATCTAGTTAA 1254 0.4298 MRGPVMVSGGCGGGGVKGRRGGRDGGGGEEVSPAALMLAALKKSMVACSVESPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENGEEEHLREQLNSGIVPNDIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLECNTEEESVELVKELKPVESALLNWAIDLMADVVVEAEYNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLRDREETSSTEEYSSMSSHSSDRQSEVDDYDSQQEMDTSGEFKRAKLDYDDHADYSHNIEEAAASNYNAESVISVTDTKTEDSCLSSSSRDDSTTTEGSNDETTSSPSTESKETNDVEMVNKCGDSVSSS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0595 417 ProSiteProfiles CRIB domain profile. 66 79 IPR000095 -
Psa3g0595 417 PANTHER MKIAA1688 PROTEIN 1 352 IPR044785 GO:0005096
Psa3g0595 417 PANTHER MKIAA1688 PROTEIN 350 393 IPR044785 GO:0005096
Psa3g0595 417 SMART PBD_5 66 100 IPR000095 -
Psa3g0595 417 MobiDBLite consensus disorder prediction 363 417 - -
Psa3g0595 417 CDD CRIB 64 94 - -
Psa3g0595 417 Gene3D CRIB domain 61 97 IPR036936 -
Psa3g0595 417 MobiDBLite consensus disorder prediction 1 28 - -
Psa3g0595 417 Gene3D Rho GTPase activation protein 98 291 IPR008936 GO:0007165
Psa3g0595 417 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 352 - -
Psa3g0595 417 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 350 393 - -
Psa3g0595 417 MobiDBLite consensus disorder prediction 291 324 - -
Psa3g0595 417 MobiDBLite consensus disorder prediction 363 401 - -
Psa3g0595 417 MobiDBLite consensus disorder prediction 309 324 - -
Psa3g0595 417 Pfam RhoGAP domain 128 262 IPR000198 GO:0007165
Psa3g0595 417 SMART RhoGAP_3 125 288 IPR000198 GO:0007165
Psa3g0595 417 ProSiteProfiles Rho GTPase-activating proteins domain profile. 111 292 IPR000198 GO:0007165
Psa3g0595 417 Pfam P21-Rho-binding domain 65 93 IPR000095 -
Psa3g0595 417 SUPERFAMILY GTPase activation domain, GAP 107 285 IPR008936 GO:0007165
Psa3g0595 417 CDD RhoGAP 128 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0595 Psa-Chr3 53624201 53626816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0595 - K20642 gmx:100812700 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0595 3 53624201 53626816 Psa3g0595 3 53624201 53626816 ECH
Psa3g0595 3 53624201 53626816 Psa6g3849 6 334756126 334759391 PCT