Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0568 ATGGGAGTTGTAACTCTTGGTGAATTGAAGCCTAGTGTTTCTGGAAAAAGAAGTTTTCGTCCAAGTTCAAGCATAAGACATGCTACTGAATGGCCAATTTCTGATGTTTCTAGTGATCTTACTATTCAAGTAGGAGCATCAACTTTTTCACTTCATAAGTTTCCTCTTGTTTCAAGGAGTGGAAGATTTAGGAAACTACTATTAGATGCAAAAGATTCGAAAGTTTCGCGCGTAAGTTTTCCGGCTGTGCCAGGTGGTGTAGAGGCATTTGAGCTAGCTGCAAAATTCTGTTATGGAATCAATGTTGATTTCAATCTCTCAAATATTGCTATGCTACATTGCACATCTCATTTTCTTGAAATGACAGAAGAATTCTCAGAAAAGAATTTGGTGACGAGAGCCGAATCGTATCTCAAGGAAGTAGTACTCCCGAACACGTCAAGCATTATAAATGTTCTTCACCATTGTGAGAATCTTGTTCCTTTATCAGAAGAAATAAATCTTGTTAATAGGTTAATCAACGCGATTGCGAATAATGCGTGCAAAGAGCAACTTACGTCGGGTTTGTTAAAACTTGATCATAATTTTCCTTCTAAAGCAACATCGATAATGGAACCTGAAACACCACTAGATTGGTGGGGGAACTCGATGAATGTTCTTAGTCTTGAGTTCTTCGAACGAGTTGTATCCGTTATGAAGTCGAAGGGACTAAAACAAGACTTGATCAGCAAGATTTTGGTAAACTATGCACATAATTCTCTTCAAGGGACTAGTAGTGTTACTTCCCTCGACGTAGAATCGCAGAAGAAACAAAAGGTTATTGTCGAAACTATAGTTCGTTTACTACCAACTCAATCAAGGAAAAGTTCAGTTCCAATCGCGTTTCTATCGTGTTTATTGAAAACCGCAATAGCGACAATGGTGCCAACTTCTTGTAGAAGTGATTTGGAGAGGCGAATCGGTCTACAACTCGATCAGGCGATTCTTGAAGACATTCTTATTCCAACGAACTCGCCTTTGAGTACTCACAACACAATGTATGATATAGATTCGATTTTGAGGATCTTTTCTACTTTCCTAAACTTGGATGAAGTGGATGATGAAGATAGTGATTTCAGAGATGAAAATCAAATGATGTACGAGTATGAATTCGACAGTCCTGGATCTCCGAAACAAAGTTCGATTCTAAAAGTATCCAAATTAATGGATAATTTTCTTACTGAAGTAGCACTAGACTCAAACCTTTTGCCATCGAAATTCATAGCACTCGCAGAACTACTCCCGGATCATGCTCGCGTTACAAGCGATGGACTCTATCGAGCTGTTGATATCTTCCTTAAGGTACATTCGAACATTAAGGACTCGGAGCGATACCGTCTAAGCAAAACAATCGATTGTCAGAAACTATCTCAAGAAGCATGCAGCCATGCAGCACAAAACGAAAGGCTACCAGTACAAATAGGCGTACAAGTTCTTTACTACGAGCAAATAAGGCTTCGAAACGCGATGAACGGAGGACACAATCAAATCATGTTCGGTGGAAATCATGGCCAGTTTCCTCAAAGATCAGGGAGTGGGATAGGCAGTGGAGCAATTTCACCGAGAGATAACTACGCATCGGTAAGACGAGAGAATCGAGAGTTGAAGCTTGAAGTAACAAGAATGAGAATGAGGTTGAATGATTTGGAGAAAGATCATGTGTCTATGAAACAAGAGCTTGTGAAAACAGGTCCTGCACAGAAGTTTTTCAAATCATTTGCTAAAAAACTGAGCAAATTTAATGCTTTGTTTCGTATAAATAGTATTCGTGGAAGTGGAACCGGAAGGTCTAGTTCACAAACTCGGTCGCGGTTTCCATTTCAAAGGCGAAAATGTCACTCAGTTTCATGA 1890 0.3947 MGVVTLGELKPSVSGKRSFRPSSSIRHATEWPISDVSSDLTIQVGASTFSLHKFPLVSRSGRFRKLLLDAKDSKVSRVSFPAVPGGVEAFELAAKFCYGINVDFNLSNIAMLHCTSHFLEMTEEFSEKNLVTRAESYLKEVVLPNTSSIINVLHHCENLVPLSEEINLVNRLINAIANNACKEQLTSGLLKLDHNFPSKATSIMEPETPLDWWGNSMNVLSLEFFERVVSVMKSKGLKQDLISKILVNYAHNSLQGTSSVTSLDVESQKKQKVIVETIVRLLPTQSRKSSVPIAFLSCLLKTAIATMVPTSCRSDLERRIGLQLDQAILEDILIPTNSPLSTHNTMYDIDSILRIFSTFLNLDEVDDEDSDFRDENQMMYEYEFDSPGSPKQSSILKVSKLMDNFLTEVALDSNLLPSKFIALAELLPDHARVTSDGLYRAVDIFLKVHSNIKDSERYRLSKTIDCQKLSQEACSHAAQNERLPVQIGVQVLYYEQIRLRNAMNGGHNQIMFGGNHGQFPQRSGSGIGSGAISPRDNYASVRRENRELKLEVTRMRMRLNDLEKDHVSMKQELVKTGPAQKFFKSFAKKLSKFNALFRINSIRGSGTGRSSSQTRSRFPFQRRKCHSVS* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0568 629 SUPERFAMILY POZ domain 22 123 IPR011333 -
Psa3g0568 629 Coils Coil 538 572 - -
Psa3g0568 629 Pfam BTB/POZ domain 37 137 IPR000210 GO:0005515
Psa3g0568 629 PANTHER OS12G0117600 PROTEIN 25 618 IPR043454 -
Psa3g0568 629 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 618 - -
Psa3g0568 629 MobiDBLite consensus disorder prediction 605 629 - -
Psa3g0568 629 SMART BTB_4 38 130 IPR000210 GO:0005515
Psa3g0568 629 Pfam NPH3 family 211 474 IPR027356 -
Psa3g0568 629 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Psa3g0568 629 ProSiteProfiles NPH3 domain profile. 211 498 IPR027356 -
Psa3g0568 629 Gene3D Potassium Channel Kv1.1; Chain A 23 143 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0568 Psa-Chr3 51006260 51010081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0568 1 448 EF-hand Containing Proteins AT2G47860 58.159 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0568 - - zju:107406883 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0568 3 51006260 51010081 Psa3g0568 3 51006260 51010081 ECH
Psa3g0568 3 51006260 51010081 Psa6g1633 6 89377347 89379800 PCT