Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3992 ATGTACAGAGAGCGAGGAGGCGTTGGATCCAAAGCCGAGGTTGCTTCCGTTGATCGGAAACGAATCAACGACGTCCTCGATAAACAACTCGAACGATCCTCGCCGTCCACTTCCAGAACCATCAACGGTAAAGATAGGTCCTCCTCTTCCTCTCTCTTAACCGCTAAGGATCATAGGGACCCTCGCTCCGGTTCCGCCACTATTCCGAAAAATCCTAACGCTTCCGATGAGGAATCTGAAACGGATAGTGAAGAGTCTGATGTTAGTGGTTCCGATGGGGATGACACGTCTTGGATCTCATGGTTTTGCAATTTGAGAGGAAATGAATTTTTTTGTGAGGTTGACGATGATTACATTCAAGACGATTTCAATCTGTGTGGTTTGAGCAGTCAAGTGCCTTATTATGATTATGCTCTTGATTTAATTTTGGATGTTGAATCCTCTCATGGTGACATGTTTACTGAGGAACAAAATGAGTTAATTGAATCAGCAGCAGAGATGCTTTATGGTATGATTCATGCCCGGTATATATTGACCAGCAAAGGAATGGCTGCCATGCTGGACAAGTACAAGAACTATGACTTTGGCAGATGCCCAAGAGTTTATTGCTCCGGACAACCTTGCCTTCCAGTTGGTCAGTCCGACATTCCTAGGTCTAGCACTGTGAAGATATATTGCCCAAGATGTGAAGACATTTACTATCCTCGGTCCAAGTATCAAGGCAGTATCCTTATTTAA 738 0.4431 MYRERGGVGSKAEVASVDRKRINDVLDKQLERSSPSTSRTINGKDRSSSSSLLTAKDHRDPRSGSATIPKNPNASDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGSILI* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3992 245 Gene3D - 195 243 - -
Psa2g3992 245 SMART CK_II_beta_2 97 240 IPR000704 GO:0005956|GO:0019887
Psa2g3992 245 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 90 194 IPR016149 GO:0005956|GO:0019887
Psa2g3992 245 ProSitePatterns Casein kinase II regulatory subunit signature. 198 229 IPR000704 GO:0005956|GO:0019887
Psa2g3992 245 PANTHER CASEIN KINASE II SUBUNIT BETA 1 243 IPR000704 GO:0005956|GO:0019887
Psa2g3992 245 PRINTS Casein kinase II regulatory subunit family signature 97 113 IPR000704 GO:0005956|GO:0019887
Psa2g3992 245 PRINTS Casein kinase II regulatory subunit family signature 114 128 IPR000704 GO:0005956|GO:0019887
Psa2g3992 245 PRINTS Casein kinase II regulatory subunit family signature 169 190 IPR000704 GO:0005956|GO:0019887
Psa2g3992 245 PRINTS Casein kinase II regulatory subunit family signature 194 215 IPR000704 GO:0005956|GO:0019887
Psa2g3992 245 PRINTS Casein kinase II regulatory subunit family signature 216 237 IPR000704 GO:0005956|GO:0019887
Psa2g3992 245 MobiDBLite consensus disorder prediction 29 50 - -
Psa2g3992 245 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 243 - -
Psa2g3992 245 MobiDBLite consensus disorder prediction 14 28 - -
Psa2g3992 245 SUPERFAMILY Casein kinase II beta subunit 95 239 IPR035991 GO:0005956|GO:0019887
Psa2g3992 245 Pfam Casein kinase II regulatory subunit 97 241 IPR000704 GO:0005956|GO:0019887
Psa2g3992 245 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3992 Psa-Chr2 414774286 414779042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3992 K03115 - gmx:100799304 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3992 2 414774286 414779042 Psa2g3992 2 414774286 414779042 ECH
Psa4g1787 4 126382631 126386172 Psa2g3992 2 414774286 414779042 PCT