Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3690 ATGAGTTCAATCATTGTTAATACATGGGTTAGTCCCAATTCTTTGTTGCGGCAAACAATCACAACCAAACACCAAACTCTCGTTCCCTTTCTAGCTATTCCCATTTCCTCAATCACCAATCAACAAACAAGAAGAAATTTGGTTTCTTCTTTTTCTTCTAAGGAAATTTATGCAGTTCAAACTAGTGTAGACAAAAAAACCGAAGAAACATTACCGAATTTCGATTTCAATGTCTACATGCTAGAAAAAGCTAATACTGTCAACAAAGCATTGGATGAATCAATTGCACTTCAAGAACCAGTGAAAATTCATGAAGCAATGCGATATTCCCTCCTCGCAGGAGGGAAACGCGTCCGTCCAATTCTCTGCATTGCCGCCTGCGAACTCGTAGGCGGCAAAGCAGAGACATCTATCTCGTCCGCATGTGCTGTGGAAATGATCCACACCATGTCGTTGATCCATGACGATTTACCGTGCATGGACAACGACGATCTGAGACGTGGAAAGCCAACGAGCCACAAAGTCTACGGCGAGGACGTTGCTGTCCTTGCCGGAGACGCGTTGCTTTCGTTGGCTTTTGAACACGTGGCAGTTTCAACGGAAGGGGTCCCACCTGAGAAAGTTGTTAGAGCGATTGCTGAGCTGGCGAAATCAGTTGGAAAAGAAGGACTCGTCGCAGGGCAGATTGTTGATTTGGAATCTGAAGGTTTATCGAATGTTGATTTAGAGACACTCGAGTTTATTCATCTGCGTAAAACCGCGGCGTTATTGGAAGCTTCGGTTGTTATGGGAGCAATAGTTGGTGGTGGAAGTGAAGATGAAATTGAGATTTTGAGAAAATTTGCAAGGTGTATTGGTTTGTTGTTTCAGGTTGTTGATGATATTCTTGACGTTACAAAATCTTCTGAGGAATTGGGGAAAACTGCTGGGAAAGATTTGGTTGCTGATAAAGTTACATATCCTAAGCTTTTGGGATTGGAAAAATCAAAAGAGTTTGCTGAAAAATTGGTTAAGGATGCACATGATTGTCTTGTTGGTTTTGATTTTGAAAAGAGTGCTCCTTTGCTTGCTTTAACTAATTACATTGCTTATAGGCAAAATTAG 1104 0.4167 MSSIIVNTWVSPNSLLRQTITTKHQTLVPFLAIPISSITNQQTRRNLVSSFSSKEIYAVQTSVDKKTEETLPNFDFNVYMLEKANTVNKALDESIALQEPVKIHEAMRYSLLAGGKRVRPILCIAACELVGGKAETSISSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKVYGEDVAVLAGDALLSLAFEHVAVSTEGVPPEKVVRAIAELAKSVGKEGLVAGQIVDLESEGLSNVDLETLEFIHLRKTAALLEASVVMGAIVGGGSEDEIEILRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLLGLEKSKEFAEKLVKDAHDCLVGFDFEKSAPLLALTNYIAYRQN* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3690 367 CDD Trans_IPPS_HT 103 365 IPR000092 GO:0008299
Psa2g3690 367 ProSitePatterns Polyprenyl synthases signature 1. 152 168 IPR033749 -
Psa2g3690 367 Gene3D Farnesyl Diphosphate Synthase 73 367 IPR008949 -
Psa2g3690 367 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC 19 367 - -
Psa2g3690 367 Pfam Polyprenyl synthetase 103 335 IPR000092 GO:0008299
Psa2g3690 367 SFLD Polyprenyl Transferase Like 79 365 - -
Psa2g3690 367 SFLD Isoprenoid Synthase Type I 79 365 - -
Psa2g3690 367 SUPERFAMILY Terpenoid synthases 79 343 IPR008949 -
Psa2g3690 367 ProSitePatterns Polyprenyl synthases signature 2. 285 297 IPR033749 -
Psa2g3690 367 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 19 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3690 Psa-Chr2 395323090 395324593 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3690 K13789 - gmx:100778289 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3690 2 395323090 395324593 Psa2g3690 2 395323090 395324593 ECH
Psa2g3690 2 395323090 395324593 Psa4g2129 4 169205814 169208917 ECH
Psa2g3690 2 395323090 395324593 Psa4g2129 4 169205814 169208917 PCT