Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3616 ATGAAGAGAACTCGATCTCAAACCAATTCCAAATCCAACACAGAACCCCCAATCAAAACCCTAACCTCTTCAAAAATCCCATTCCCCGTTAAAAAAGTCCCCAAACTCACCATCAAAACCAAACAACCACATCTTCATCTCCCCGTAACACCACCACCACCAACAATCGCAAAACCATTATCATCACACGGCGAACTCCAATCCGCTCTCAACCACCTTCGCTCCGCCGACCCACTCCTATCAACCATCATCAACACTTTCCCTTCCCCACAATTCTCAACCAACATCACACCCTTCTTTTCTCTCATCAAAAGCATAATCTCCCAACAACTCTCCAACAAAGCCGCATCCTCGATCGAAAACCGTTTCATCTCTCTCTTTCAGAACCAATCCTCAATCCTCCCCGACGCCGTTTTATCCTTTTCCCCAAACCACCTTCGCCAGGTCGGAATCTCGGGACCGAAAGCAACTTACATTCACGACCTTTCCTCCAAATACGCTAATGGCTTTCTGTCTGATTCATCGATTCTCGAAATGGATGATGAAACACTGTACGAGAAATTAACGTCGGTTAAAGGGATTGGACCTTGGTCGGTTCATATGTTTATGATTTTTACACTTCATCGTCCTGATGTTTTGCCGGTTGGGGATCTTGTTGTGAGGAGAGGTGTGGAAAAGTTGCATGGTCTTAAGGGTTTGCCTTCACCTTCACAAATGGAGGTTTTGTGTCATAAATGGAAGCCTTATAGGTCGGTTGGATCTTGGTATATGTATAGGTTTGTGGAAGCTAAAGGGGTTTTGCCAAATCCCACTACCACGTTGTGTTAA 828 0.4505 MKRTRSQTNSKSNTEPPIKTLTSSKIPFPVKKVPKLTIKTKQPHLHLPVTPPPPTIAKPLSSHGELQSALNHLRSADPLLSTIINTFPSPQFSTNITPFFSLIKSIISQQLSNKAASSIENRFISLFQNQSSILPDAVLSFSPNHLRQVGISGPKATYIHDLSSKYANGFLSDSSILEMDDETLYEKLTSVKGIGPWSVHMFMIFTLHRPDVLPVGDLVVRRGVEKLHGLKGLPSPSQMEVLCHKWKPYRSVGSWYMYRFVEAKGVLPNPTTTLC* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3616 275 MobiDBLite consensus disorder prediction 1 24 - -
Psa2g3616 275 Pfam HhH-GPD superfamily base excision DNA repair protein 103 247 IPR003265 GO:0006284
Psa2g3616 275 SUPERFAMILY DNA-glycosylase 96 260 IPR011257 GO:0003824|GO:0006281
Psa2g3616 275 MobiDBLite consensus disorder prediction 7 21 - -
Psa2g3616 275 CDD ENDO3c 102 260 IPR003265 GO:0006284
Psa2g3616 275 Gene3D - 71 259 - -
Psa2g3616 275 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 2 272 - -
Psa2g3616 275 SMART endo3end 107 262 IPR003265 GO:0006284
Psa2g3616 275 Gene3D Hypothetical protein; domain 2 96 209 - -
Psa2g3616 275 PANTHER HHH-GPD BASE EXCISION DNA REPAIR FAMILY PROTEIN 2 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3616 Psa-Chr2 390694306 390695757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3616 K01247 - fve:101299704 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3616 2 390694306 390695757 Psa2g3616 2 390694306 390695757 ECH
Psa5g0400 5 32233568 32239836 Psa2g3616 2 390694306 390695757 ECH